Fulvitalea axinellae: FUAX_24330
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Entry
FUAX_24330 CDS
T09748
Symbol
rhlE
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fax
Fulvitalea axinellae
Pathway
fax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FUAX_24330 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fax03019
]
FUAX_24330 (rhlE)
Enzymes [BR:
fax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FUAX_24330 (rhlE)
Messenger RNA biogenesis [BR:
fax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FUAX_24330 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Band_7_1
PhoH
Motif
Other DBs
NCBI-ProteinID:
BDD10001
UniProt:
A0AAU9DAN1
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All DBs
Position
3176955..3178484
Genome browser
AA seq
509 aa
AA seq
DB search
MPLPYNDLFLRTDYNSRQNRFIRLTTRTGDKTTGHLFGQTTPQRNASRLRKDDFQKNISD
VLFEDFKLGKFLLRGLQEAGIEEMTPIQEKTIPAVSAGKDVLGIAPTGTGKTIAFLLPVI
RNLNYSKEGAPRCLILVPSKELVMQIADVAETLTKYINLRITRAYGGGSKKDQIASLENG
TDIVVATPGRLQELIAIRALNPRHIKHFIVDEADTLMDQGFLPQLNLVLDSLPERRQNLL
FSATFTHETQEIANSFMNNPTKIVVGEIKPPANIKQQAYDAVNIKTKLNLLADLLNDSET
FTKTIVFTESRKVADRTQQFLHHRLFTGKAQVIHSNKTENFRFRAIEEFKTGEATVLVAT
SVAAKGIDIDDVSHVINFEVPKEYEEYVHRIGRTGRQGKYGEAITLVEPEEMPDFENIQA
LTGTVIPLMPLPEGTMLVEMAPRKPTADRHGNSVKKHKVKEIERGPAFHEKKDKNKKTNQ
RVKAMPHLSAKAKKSLGLKSNGRPRKRRK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
ttgcccttgccttacaatgacttatttttgcggactgattacaattcccgccaaaaccgg
ttcattaggttaacaacccggacaggcgacaaaaccacagggcatctctttgggcagaca
actccccaacggaacgcaagccggctccgcaaagacgatttccagaaaaatataagcgac
gtgctattcgaagatttcaaacttggcaaattccttcttagaggattgcaggaagcgggc
atcgaggagatgaccccgatacaggaaaaaaccattccggcggtaagcgctggcaaggac
gtgctgggcatcgcgcctacgggcacgggaaaaacaattgcgtttctcttgccggtgatc
agaaacctcaattactccaaagagggagcgccaagatgcctgatccttgttccgtcaaag
gaattggtgatgcaaatcgccgacgtggccgaaacgctgacaaaatacattaaccttcgt
atcacgagggcttatggtggcggtagcaaaaaagaccagatcgcgtctttggaaaacggc
accgacatcgtggtggcgactcccggcaggctccaagagcttatcgctatccgggctctg
aacccacgccatatcaaacactttatagtggacgaagccgacaccttgatggaccaaggc
tttcttccgcaactgaacttggtactggacagccttcctgaaagacgccaaaacctgctt
ttctcggctacgtttacgcacgagactcaggaaatcgccaactcgtttatgaataatccg
accaaaatcgtggtcggagagattaagcctccggccaatatcaagcaacaggcctacgac
gccgtaaatataaagacgaagctgaacctgttggccgacttgctaaacgacagcgagacg
tttaccaaaacgatcgtttttaccgaaagccggaaggtggccgaccgtacgcagcaattc
ctccaccacaggctatttaccggaaaggcgcaggttattcactcaaacaagacagagaat
ttccgtttccgcgcgattgaggaattcaaaaccggagaagccactgttttagtcgccact
agcgtagcggcgaagggtatcgatattgatgatgtgtcgcacgtaatcaacttcgaggtt
cccaaagaatacgaagaatacgttcaccgtattggccggacaggtcgtcaaggaaaatac
ggcgaagccatcacgcttgtagagccggaagaaatgcccgacttcgaaaacatccaagcg
ctgacaggcaccgtaattccgcttatgcctcttcccgaagggacaatgttggtggaaatg
gcacctagaaaaccaactgctgacaggcacggtaactccgtaaagaaacacaaagtcaag
gaaatcgagcgcggtccagcttttcatgagaaaaaagacaaaaacaaaaagaccaaccaa
agggtaaaagccatgcctcatttgagcgccaaagcgaaaaagtctttggggttgaaatcg
aacggacgcccaagaaaacgaagaaaataa
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