Fulvitalea axinellae: FUAX_33870
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Entry
FUAX_33870 CDS
T09748
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fax
Fulvitalea axinellae
Pathway
fax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FUAX_33870 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fax03021
]
FUAX_33870 (rpoC)
03400 DNA repair and recombination proteins [BR:
fax03400
]
FUAX_33870 (rpoC)
Enzymes [BR:
fax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FUAX_33870 (rpoC)
Transcription machinery [BR:
fax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FUAX_33870 (rpoC)
DNA repair and recombination proteins [BR:
fax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FUAX_33870 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
DUF6744
Motif
Other DBs
NCBI-ProteinID:
BDD10955
UniProt:
A0AAU9CNG5
LinkDB
All DBs
Position
complement(4323853..4328139)
Genome browser
AA seq
1428 aa
AA seq
DB search
MAFRKNKKITNDFSRVTISLASPESILESSHGEVTQPETINYRTYKPEMGGLFCERIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPVAHIWYFRSLPNKI
GYLLGLPTKKLDQIIYYERYVVIQAGVKEEDGVQNMDFLTEDEYLDIIDKLPRENQMLDD
EDPNKFIAKMGAEALEMLLARLDLDSLSYQLRHQAQTDTSQQRKAEALKRLRVVEAFRDS
TKRIENRPEWMVIRMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIDIK
APEVILRNEKRMLQEAVDSLFDNSRKVNAVRSDGNRALKSLSDMLKGKQGRFRQNLLGKR
VDYSGRSVIVVGPELKMHECGLPKNMAAELFKPFVIRKLIERGIVKTVKSAKKIVDRKDP
VVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGDQM
AVHVPLGHEAVLEAQVLMLASHNILNPANGAPIAVPSQDMVLGLYYLTKGRKSTPEYPIA
GEGMTFYGAEEVIIALNEGRLSKNAFIKVRTMVRDDETGELSEQLIETVAGRVIVNQYVP
DEVGYIDDLLTKKTLQKTIAKVYQITGMDGTAKFLDDIKYIGFQTAYKGGLSMGLGDIMI
PEAKESLVAQAKEEVSAVWDNYQMGLITDNERYNQVIDIWTRINSQLTSTLMTQLEEDQG
GFNSIYMMMHSGARGSREQIRQLGGMRGLMAKPQKNIAGSVGAIIENPILSNFKEGLDVL
EYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVVINDEDCGTLRGLTVSALKDNED
IVEPLSERILGRTSLHDVFAPGQDESNEPLVKAGEEITEKIAKRVEEAGVEEMEIRSVLT
CETRRGVCTKCYGRNLSTLRMSQKGDSVGVIAAQSIGEPGTQLTLRTFHVGGTASHIAEE
ASIESRFAGVVKFDEIRSISATDIEGEPSQVVLGRTGEIKIIEEKTGKELISYNVPYGSY
LKVKDGEKVEKGHRMCFWDPFNAVIISEFAGKANFESIEEGYTYKVEMDEATGHQEKVIV
DSRDKTKNPAIHIGEGEDARSYNIPVGAHLVVEDGDAIEAGKVLVKIPRATGKSADITGG
LPRVTELFEARNPSNPAVISEIDGVISYGGIKRGNREIYVESKDGVKKRYLVSLSKHILV
QENDFVKAGMPLSDGAKTPADILAIEGPTKVQEYVLNEVQAVYRLQGVKINDKHIEVVVR
QMMQKMMVVDPGDTIFLQNQVVDRWTFREENDRILDKKVVVDAGESGVLKPGQIITARQL
RDENSSLRRRDMKLVKVRDASAAVSKPTLQGITQSSLGTESFISAASFQETTKVLSEAAI
RGKRDELRGLKENVIVGHLIPAGTGIRDFQDVIVTPKQELDAEDVPTV
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagaaaaaataagaaaataaccaacgacttttcacgggtaacgatcagcctt
gcctctccagaatctattctggagagctcgcacggcgaggttacgcaaccagaaactatt
aactataggacttacaagcctgaaatgggtggcttgttctgtgagcgtatcttcggccct
gttaaggactgggaatgtcactgtggcaaatacaagagaatccgatacaaaggaatcatt
tgtgaccgttgcggtgtcgaggtaacggagaagaaagtgcgtcgcgagcgcatgggccac
atcgagttggtggtgcctgtagctcatatctggtacttccgttctttgccgaacaaaatc
ggttacctgttaggtttgccgaccaagaagcttgaccagatcatctactacgagcgttat
gtggtgatccaagccggtgtcaaggaagaggatggagttcagaacatggacttcctcact
gaggacgaatatcttgatatcatagataaattgcctcgcgaaaaccaaatgttggacgat
gaagaccctaacaagttcatcgccaagatgggtgcggaggcattggaaatgctgttggcc
agattggatttggacagtctctcataccagttgagacaccaagcccaaacggacacgtca
cagcagcgtaaggctgaggccctgaagcgtcttcgcgttgtcgaagccttccgtgactcg
accaagcgcatcgaaaaccgtccggagtggatggtgatccgcatggttccggttattccg
ccggaattgcgtccgttggtgcctttggacggtggccgtttcgccacgtcggatttgaac
gacctttatcgtcgtgtgattatccgaaacaaccgtctgaagcgtctgatcgacatcaag
gcacctgaggtgatcttgagaaacgaaaagcgtatgcttcaggaagctgtcgactcgttg
ttcgacaactcccgtaaggtgaacgcagttcgttctgacggtaaccgcgctttgaaatct
ctcagtgatatgctgaaaggtaagcaaggtcgtttccgtcaaaacctcctcggtaagcgt
gttgactactctggtcgttcggttatcgttgtaggtcctgaattgaagatgcacgaatgt
ggtttgccaaagaacatggcagccgagcttttcaagccattcgttattcgtaagcttatt
gaacgcgggattgtaaagactgtgaagtcggcgaagaaaatcgttgaccgcaaagatcct
gtcgtttgggatattttggagaatgtgttgaaaggacacccagttcttcttaaccgtgct
ccaacgcttcacagattgggtattcaggccttccagccaaagttgatcgaaggtaaggct
atccagttgcacccgctcgtttgtacggcctttaacgccgactttgacggtgaccagatg
gcggttcacgttcctttgggacacgaagccgttttggaagcccaagtcttgatgttggct
tcgcacaatatcctgaaccctgccaacggtgctcctatcgccgtaccgtcgcaggatatg
gtattgggtctgtactacttgaccaaaggacgtaagtctactcctgagtatccaattgcg
ggtgagggaatgacattctacggtgctgaagaagtgatcatcgctttgaacgaaggccgt
ttgtctaaaaacgcctttatcaaagttcgcacaatggttcgtgatgacgagactggcgag
ctttcagagcaattgatcgaaacagtcgctggtcgtgtgatcgtaaaccagtacgttcct
gacgaagttggatacattgatgatttgttgacgaagaaaactcttcagaaaacgatcgcc
aaagtataccagatcacgggaatggacggaactgctaagttccttgatgatatcaaatac
atcgggttccagactgcctacaaaggcggactctcaatgggacttggcgatatcatgatt
cctgaagccaaagagtcgttggtggctcaagctaaggaagaggtttctgctgtttgggat
aactaccaaatgggtcttatcaccgacaacgagcgttacaaccaggtgattgacatctgg
acccgtatcaactcacagttgacttcaaccttgatgacgcaacttgaggaagatcaaggc
ggattcaacagtatctacatgatgatgcactcaggagcccgtggttctagagagcagatt
cgtcagcttggtggtatgcgtggtctgatggctaagcctcagaaaaacatcgcaggttcg
gtaggagcgattatcgaaaacccgattctctcgaactttaaagaaggtcttgacgtactt
gagtactttatctctactcacggtgctcgtaaaggtcttgcggatacagcccttaaaact
gccgacgccggttatcttacccgtcgtttggttgacgtggcgcaggatgttgtaatcaac
gacgaggactgcggtacgttgcgtggcttgaccgtttcggcattgaaagacaacgaggat
atcgttgagccattgtcggaaaggattctcggccgtacttcattgcacgacgtatttgct
cctggccaagacgaaagcaacgaaccgttggtgaaagccggtgaggaaatcactgagaaa
atcgccaagcgtgttgaggaagctggagttgaggaaatggaaatccgttcggtacttact
tgcgaaacccgtagaggtgtttgtaccaagtgttacggacgtaacctctcgacattgcgt
atgtcgcagaaaggtgactctgtcggtgtaatcgcagcgcagtcgatcggtgaacctggt
acacagcttacactccgtacattccacgtaggtggtacagcttctcacattgctgaagaa
gcgtctatcgaatcgcgttttgcaggggttgttaagtttgacgaaatccgctcgatcagc
gctacggatatcgaaggcgagccttcgcaagtagtacttggtcgtacgggtgaaatcaag
attattgaagaaaaaactggcaaagagctgatttcttataacgttccttacggatcttat
ttgaaggttaaggatggtgagaaagtggagaaaggacaccgtatgtgtttctgggatcca
tttaacgccgttattatctcggaatttgccggtaaggccaacttcgaatctatcgaagaa
ggctatacatacaaagtcgaaatggatgaggctacaggtcaccaagagaaggtgattgtt
gactcaagggataagactaaaaacccagcgatccatatcggcgaaggagaagacgccaga
tcttataacattcctgtaggagcccaccttgtggttgaggacggggacgctatcgaggct
ggtaaagttctcgttaagattccaagagcgacaggtaagtctgccgatattaccggtggt
cttccgcgtgttaccgagttgttcgaggcccgtaacccatctaacccagcggttatttcg
gagattgacggtgttatctcttacggtggaatcaagcgtggtaaccgtgagatttacgtt
gagtcgaaagacggagtgaagaagcgttacctcgtatcgctctcgaagcacatccttgtt
caggaaaacgactttgtgaaggctggtatgccattgtctgatggagctaaaactcctgcc
gacatcttggctatcgaaggaccgaccaaagttcaggagtacgtattgaacgaagttcag
gccgtataccgtctgcaaggtgtaaaaatcaacgacaagcacatcgaggttgttgttcgc
cagatgatgcagaaaatgatggttgtcgatccaggcgacactattttcttgcagaaccaa
gtagtggacagatggacgttccgcgaggagaacgaccgtatccttgacaagaaagtagtt
gtcgatgcgggtgagtcaggagttttgaagccgggccagattatcactgcccgtcagttg
agagacgaaaactcaagcttgcgtcgtcgcgatatgaagttggtcaaagtgcgtgacgct
tcggccgcggtttccaagcctacgcttcagggtattacccagtcgtcattgggtacggaa
agctttatttcggcagcgtcgttccaggaaacgaccaaggttcttagcgaagcggctatc
cgcggtaagcgtgacgagttgcgcggactgaaggaaaacgtgatcgtaggacacttgatc
cctgcgggtacgggtatccgtgacttccaggacgttatcgtaacgccgaaacaggagctc
gacgccgaggatgtccctacggtgtaa
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