Fulvitalea axinellae: FUAX_33880
Help
Entry
FUAX_33880 CDS
T09748
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
fax
Fulvitalea axinellae
Pathway
fax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FUAX_33880 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fax03021
]
FUAX_33880 (rpoB)
03400 DNA repair and recombination proteins [BR:
fax03400
]
FUAX_33880 (rpoB)
Enzymes [BR:
fax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FUAX_33880 (rpoB)
Transcription machinery [BR:
fax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FUAX_33880 (rpoB)
DNA repair and recombination proteins [BR:
fax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FUAX_33880 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
BDD10956
UniProt:
A0AAU9CFK8
LinkDB
All DBs
Position
complement(4328168..4332037)
Genome browser
AA seq
1289 aa
AA seq
DB search
MANTIHPNRRNFSSIKKVIDYPDFLDVQLKSFRDFFQLDTAAEKRAQEGLYKVFSENFPI
TDSRESYVLEFVDYLIDPPKYTVEECIDRGLTYSVPLKAKLRLSCNDEDNEDFETMEQEV
FLGNIPYMTGKGSFVINGAERVIVSQLHRSPGVFFAQSKHTNGTKLYSARIIPFKGSWIE
FATDVNSVMYAYIDRKKKFPVTTLLRAIGYGSDKDILDLFGLSEELEATKKALKDAEGRK
LAANVLKTWTEDFVDEDTGEVVSIDRNEVILERDTVLGEEEIEKILESGTKSIILHKKDV
VTTDYTIIFNTLQKDASNSEREAVELIYRQLRNSEAPDEQTARELIQNLFFSDKRYDLGE
VGRYRINKKLGINLSKDVRVLSNQDIVLIVKYLIGLINSKAVVDDIDHLSNRRVRTVGEQ
LYSQFGVGLARMARTIKERMNVRDNEEFKPADLINARTLSSVINSFFGTNQLSQFMDQTN
PLAEITHKRRMSALGPGGLSRERAGFEVRDVHYTHYGRLCTIETPEGPNIGLISSLCVHA
KVNPMGFIETPYRKVTEGAVDETGVVYLTAEEEDDSFIGQANVPVGGDGRLEQDQVKARL
QGDFPVVAPEELKFMDVAPNQIVSVAASMIPFLEHDDANRALMGSNMQRQAVPLLKPNSP
IVGTGLEGRVAGDSRTLVVSEGGGTVEYVDGNKIVIRYDLTDDEVLAGFDNEVKEYSLVK
FRRTNQDTCMNLRPIVLKGDKVTKGQILCEGYATQQGELALGQNLQVAFMPWQGYNFEDA
IVISEKVVQGDVFTSIHIDEYELEVRETKRGEEELTSEIPNVSEDAVKNLDENGIIRTGA
EIKEGDILIGKITPKGETDPTPEEKLLRAIFGDKAGDVKDASLKASPSLNGVVIDTKLFS
RPKKDKDLRAKAKKEVEELKSRYSGELLKLRRRMIGKMDELLGGKTSQGVKHKFGDEVLS
AGVPFGFANIDNNLFPEKNIYRDESTYSVPEEVNLLADLNLEGWTDDEHTNELLQELVKN
YQNKRNEIAGRFKKERFTLEVGDELPAGIVQLAKVYIAKKRKLKVGDKMAGRHGNKGVVA
KIVREEDMPFLEDGTPVDICLNPLGVPSRMNIGQIYETVLGWAGLKLGKKYATPIFDGAT
MAQVAAELEEAGLPEFGRTYLHDGLTGERFDQPVTVGVIYMLKLGHLVDDKMHARSIGPY
SLITQQPLGGKAQFGGQRFGEMEVWALEAFGAANVLQEILTIKSDDVVGRAKAYEAIVKG
ENMTKPNVPESFNVLVHELRGLALEITLD
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
ttggctaatactattcacccaaacaggagaaatttctcgtcgatcaagaaggtcattgat
taccctgactttctggacgtacagctgaagtcattccgcgacttcttccagctggacacc
gcggccgagaaaagggctcaagagggcctatacaaggtgttctccgagaactttccaatc
acggacagtcgtgagagttatgttctggagttcgtggattacttgatcgaccctccgaag
tacacggttgaggaatgcatcgatcggggcctgacctattccgttcctttgaaggccaag
ttgcgcctctcgtgtaacgacgaggacaacgaggatttcgagacaatggagcaggaagtg
tttttggggaatatcccttacatgaccggaaagggctctttcgtaatcaatggtgccgaa
agggttattgtatcccagttgcaccgctcgccaggcgtgttcttcgctcaaagtaagcac
acgaacggcaccaaactctactcggccagaattatcccgttcaaagggtcgtggattgag
ttcgctactgacgtgaacagcgtcatgtacgcatacattgaccgtaagaaaaaattcccg
gtcactactttgcttagggctatcggctacggatctgacaaggacattctcgacttgttc
ggtctttccgaagagcttgaggccacgaagaaagcgttgaaagacgccgagggcagaaag
ctcgccgcaaatgttttgaagacgtggacggaagacttcgtggacgaagataccggcgaa
gtagtttctattgaccggaacgaggttatccttgagcgcgacaccgtgttgggcgaagag
gaaatcgagaagattcttgagtcgggaaccaagtctatcatccttcacaaaaaggatgtt
gtgacaaccgattacacgatcatttttaataccctccagaaagacgcgtcgaacagtgag
cgcgaggcagtggaattgatctaccgccaattgcgtaacagtgaggctcctgacgagcag
acagctcgcgagctgatccagaacttgttcttcagcgacaagcgttacgatctgggcgag
gtaggtcgttacagaatcaacaagaaattgggcatcaaccttagcaaagacgttagggtg
ttgtcaaatcaagatattgtcttgatcgtcaagtatctcatcggattgatcaactctaaa
gcggttgtcgatgatattgaccacttgagcaaccgtcgcgttagaactgtgggcgagcag
ctctacagccagttcggcgtaggtttggccaggatggcgagaacgatcaaggaaagaatg
aacgttcgtgacaacgaggagttcaagccggctgatttgatcaacgcgaggactttgtct
tctgtgatcaactctttcttcggaacgaaccagttgtctcagttcatggaccaaaccaac
ccgcttgcggaaattacgcataagcgtagaatgtctgctttgggtcctggtggtctctct
cgtgagcgtgcgggctttgaggttcgtgacgttcactatacgcactacggtcgtctctgt
acaattgagacgcctgaaggtccgaacattggtctgatttcttcactttgcgttcacgcc
aaagtgaacccgatgggattcatcgaaactccgtaccgtaaggttaccgagggtgccgtt
gacgaaaccggagtggtttacttgacagctgaagaagaagacgactcgtttatcggacag
gctaacgtaccggtaggcggagacggaaggcttgagcaagatcaggtgaaagcccgcttg
caaggtgacttcccagttgtggctcctgaggaactgaagttcatggacgttgcgccaaac
cagattgtatctgtggccgcttctatgattcctttcttggagcacgatgacgccaaccgt
gctttgatgggatcgaacatgcagcgtcaggccgttccgttgttgaaaccgaattctccg
atcgtaggtactggtcttgaaggccgtgtagctggcgactctagaactttggttgtttca
gaaggtggcggtacagttgagtacgttgacggtaacaagattgtgatccgttacgatttg
actgatgacgaagtgttggctggtttcgacaacgaggtgaaagaatactcgcttgttaag
ttccgcagaactaaccaggatacttgtatgaaccttcgtccgattgtcttgaaaggtgat
aaagtgacgaaaggtcagatcctttgcgaaggttacgctactcagcaaggtgaattggcc
cttggccaaaacttgcaggttgccttcatgccttggcaaggttacaactttgaggatgcc
atcgtaatttccgaaaaggttgttcagggtgacgtgttcacatcgattcacatcgacgaa
tacgagcttgaggttcgcgaaacgaagcgtggtgaggaagaattgacttctgaaatcccg
aacgtaagcgaggacgcggttaagaaccttgacgagaacggaattatccgtactggtgcc
gagatcaaggaaggcgatatcctgatcggtaagattacgcctaaaggcgaaaccgatccg
actccggaagaaaaacttctccgtgcgatcttcggtgacaaagccggtgacgttaaggac
gcttctttgaaagcttctccttcgttgaacggtgtggttatcgacaccaaattgttctct
agacctaagaaggacaaagaccttagagctaaagccaagaaagaggttgaggaactgaag
tcaaggtacagtggcgagttgctgaagctccgcagacgtatgatcggtaagatggacgaa
ctgttgggcggaaagacttcgcaaggagttaagcataaattcggagacgaggtgttgagc
gctggcgtacctttcggtttcgctaacatcgacaataacttgttccccgaaaagaacata
taccgggacgaaagtacttacagcgtaccggaagaggtgaacttgttggccgaccttaac
ctcgaaggttggacggacgacgagcacactaacgaattgttgcaggaattggttaaaaac
taccagaacaagcgtaacgaaatcgccggtcgcttcaagaaagagcgttttacgctcgaa
gtcggtgacgagttgccagctggtatcgtacaattggccaaggtttacatcgctaagaag
cgtaagctgaaagtgggtgacaagatggccggtcgtcacggtaacaaaggggtagtagcc
aagattgtccgcgaagaggacatgccgttcctcgaagacggaacaccggttgatatctgc
ttgaacccattgggtgtaccatcgcgtatgaacatcgggcagatctacgagaccgtattg
ggttgggctggacttaagcttggcaagaagtacgctacgccgatcttcgacggagctact
atggcccaagtggcagcagaacttgaggaagccggtcttccagaattcggccgtacatat
ttgcacgacggccttacaggtgagcgttttgaccagccggtgacggtaggtgtgatttac
atgttgaagttgggccacttggtggacgacaagatgcacgcccgttcgatcggaccatac
tcgcttattacgcaacagccattgggtggtaaagcccagttcggtggccagcgtttcggt
gagatggaagtgtgggcgttggaggccttcggtgccgctaacgtcttgcaggaaatcttg
acaatcaaatctgacgacgttgttggccgtgccaaggcgtacgaggcgattgttaaaggc
gaaaacatgactaagcctaatgttcctgaatcgtttaacgtacttgtgcacgaacttcgc
ggtttggcacttgaaatcacacttgactaa
DBGET
integrated database retrieval system
