Fulvitalea axinellae: FUAX_34590
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Entry
FUAX_34590 CDS
T09748
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fax
Fulvitalea axinellae
Pathway
fax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FUAX_34590 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fax03021
]
FUAX_34590 (rho)
03019 Messenger RNA biogenesis [BR:
fax03019
]
FUAX_34590 (rho)
Transcription machinery [BR:
fax03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FUAX_34590 (rho)
Messenger RNA biogenesis [BR:
fax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FUAX_34590 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
NACHT
OB_RNB
S1CSD-TOTE-2
Mor
AAA
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
BDD11027
UniProt:
A0AAU9CVH4
LinkDB
All DBs
Position
complement(4418232..4420208)
Genome browser
AA seq
658 aa
AA seq
DB search
MYNIEELSMRLLSELREIAEELGLKNYKRLPKKELIYKILDQQAITPEDKLPKKKETAAK
EPENAPATDDKPAPAPRKRNLPKRENVAKDKGEKKVIEKKAPEKKAEQKSKPKPKPKPKT
ATGGTDLLKSFTEEASGAVANKPKQQEKEPEAPRAEEPVAKIPARKSVVDTPAPTPATTE
DKAEPAKPVSEIRRRVVPKAAQNMAEEKPVTNIPPRREVNVNMADWSQKEESQEKKPEPT
VPSRQQPESQENAPAPTPTPAPAPTPVRRRTPSGQGNYSQQAGNVKEFDGLISNEGVLEI
MQDGYGFLRSADYNYLASPDDIYVSPSQIKLFGLKTGDTVRGQIRPPKEGEKYFALLRVE
SVNGKTTEEIRDRVSFEYLTPLFPTEKLNLTTTPSEYSTRILDLFAPIGKGQRGMIVAQP
KTGKTVLLKQIANAVAANHPEVYLMILLIDERPEEVTDMARSVNAEVVSSTFDEQADRHV
KVSSMVLEKAKRMVECGHDVVILLDSITRLARAYNTVIPSSGKVLSGGVDANALHKPKRF
FGAARNVEEGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELQLDRKLSNRRIYPAIDV
PASGTRREDLLMDRETLQRVWILRKFMSDMNSQESMEFLLERMKGTKDNIEFLLSMNG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatatcgaagaactgagcatgcgtctcctgtctgagttgcgggaaatcgctgaa
gaattaggtcttaaaaactataaaaggctccctaaaaaagagttgatatacaaaatactt
gaccaacaagctattacccccgaagataaacttccaaagaaaaaggagacagctgccaaa
gagcctgaaaacgctccggcaaccgatgataaaccagctcccgcacctcgcaaacgtaac
cttccgaaaagggagaatgtagctaaggataaaggagaaaagaaagtaatagaaaaaaaa
gctccggagaaaaaggctgagcagaaatcaaagcccaagcctaaaccaaaaccaaaaacg
gccactggcggaactgacttgctgaaatcctttacggaagaggcgagcggagctgtcgcc
aataagcctaagcaacaggaaaaagaaccggaagcgccacgcgccgaagagcctgtagca
aagatcccggcaaggaagtctgtagtagacactccggctccgacaccggccacaaccgaa
gacaaagcggaaccggccaaaccggtatccgagatcagaagaagagttgtgccgaaagcc
gcccagaatatggctgaggaaaagcctgttacgaatattcctccgcgcagagaggtgaac
gtaaacatggcggattggtcgcagaaagaagagtcgcaggaaaagaaaccggagccgacc
gtaccttcgcgccaacaacctgaaagccaggaaaacgcacctgcaccaacaccgacgcca
gcgccagcgccgactcccgtgcgtcgcagaacgccgtccggacagggaaactattctcag
caggccggaaacgttaaagaatttgacggccttatttctaatgagggcgtattggaaatc
atgcaggacggatacggattcctccgttcagcagattataactacctcgccagcccggac
gatatctatgttagtccatcgcagattaagctgtttggcctgaaaacaggtgatacggta
cgtggccagattcgtccgccgaaagaaggagagaagtactttgcgctgttgcgcgtggaa
agcgtaaacggaaaaaccaccgaagaaattcgcgacagggtttctttcgaataccttaca
ccgctttttccaacagaaaaacttaacctcactactacgcctagcgaatactctacgagg
attcttgacctgttcgctcctatcggtaaaggtcagcgtggtatgatcgtggcccagcct
aaaacaggtaagactgttttgctgaagcaaatagcgaatgccgttgcggccaatcacccc
gaggtttacttgatgatcttgctcattgacgaacgccctgaggaagtgacggacatggcc
cgtagcgtaaacgccgaggttgtgtcatctactttcgacgagcaggccgatcgccatgtt
aaggtatcgagcatggttctcgaaaaagctaagcgtatggtagagtgcggtcacgatgtt
gtgatcttgcttgattcgattacccgtttggcccgcgcttataacactgttatcccgtcg
tcgggtaaagtgctttccggtggtgtggatgcaaacgcgcttcacaagcctaagcgtttc
ttcggtgccgcgcgtaacgttgaggaaggcggatcgttgacgattatcgccaccgctttg
atcgaaacaggttcgaagatggacgaagtgatcttcgaagagttcaaaggaacgggcaac
atggaactccagttggaccgcaagctttcgaaccgtcgtatttaccctgcgatcgacgtt
ccggcttcgggtactcgtcgcgaggatttgttgatggatcgcgagacactccagcgcgta
tggattctccgcaagtttatgtccgacatgaattcgcaggaatctatggaattcctgctt
gagcgcatgaaaggaaccaaagacaatatcgaattccttttgtcgatgaacggctaa
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