Flavivirga abyssicola: Q4Q34_00465
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Entry
Q4Q34_00465 CDS
T09912
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fay
Flavivirga abyssicola
Pathway
fay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Q4Q34_00465 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fay03400
]
Q4Q34_00465 (priA)
Enzymes [BR:
fay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q4Q34_00465 (priA)
DNA repair and recombination proteins [BR:
fay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q4Q34_00465 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
nSTAND3
TrmB
Nrap_D6
T3SS_CopN_3rd
AAA_30
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
WVK13508
LinkDB
All DBs
Position
complement(123257..125710)
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AA seq
817 aa
AA seq
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MSFFIDVIIPVPLKKLFTYNVTASEADFLKVGMRVAVPFGKSKIYTGIVYKIHQEAPTAY
EAKDIQQILDDSPIVTEKQLQLWQWISNYYMCTLGDVMRAALPSAFILESETVILKNTIK
SIDEGILKDDEFLVYEALHHQSSLKIHDISNILDKKNVLPVIKRLIEKEAISVEEEVYEK
YKPKLVRYVKLGASFSSETALQQLLENLNRAPKQRQVILTLFSVSATTKKPVKVSDLSSE
SGASTAVIKSLIDKGILEEYYIQTDRVQYSGEDNEATKNLNEYQETALKEIKNAFVKHAV
VLLHGVTSSGKTEVYVKLIEDTINQGKQVLYLLPEIALTAQLITRLQNYFGEQVAIFHSK
YSSQERVEVWNHVLNNTVKAKIVLGARSSIFLPFDNLGLIVVDEEHEQSFKQFDPAPRYH
ARDTAVVLANMHGAKILLGSATPSLESYFNAKQNKYGFVEITKRYNDVLMPDIELVDIKE
KFKKKLMKGHFSDRLIEEMTETLREGHQIILFQNRRGFSPIVECNTCGNSPQCPNCDVSL
TYHQYRNQLRCHYCGYNSAMIKDCMACGSSELDTKGFGTEQIEEEVKLLFPDYKVARMDL
DTTRGKYGYEKIITALEQQEIDILVGTQMLTKGLDFRNVKLVGIMNADNMLNFPDFRAHE
RSFQLMLQVSGRAGRTDERGKVLIQTYNPYHNILQQLSTNNYVEMFNEQMNERYNYKYPP
VYKQIKITLKHKDYNRVDTASVWFAKSLRQFFKDNVLGPESPPISRIRNQFHKNILVKIP
KEHSLSKTKKAIIKVNNSFSSIKDFRSVKIILNVDNF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
ttgagcttttttatagacgttataattcctgttccgcttaaaaagttatttacttataat
gtaacagcgtctgaagctgattttttaaaagttggtatgcgtgttgctgttccttttgga
aagtctaaaatttatacaggaatagtttataaaatacatcaggaagcccccacagcatac
gaagctaaggatattcagcaaattctagatgattctcctattgtaacagaaaagcaatta
caattgtggcaatggatttctaactactacatgtgtacgctaggggatgtgatgcgggct
gctttaccaagtgcatttattttagaaagcgaaaccgttattttaaagaatactattaaa
agcattgatgaaggtatattgaaagatgatgagtttttggtttacgaagcattacaccat
cagtcgtctttaaaaattcatgatatttctaatatccttgataaaaagaatgtattaccg
gttattaagcgattaattgaaaaagaggctatttctgtagaagaagaagtctatgaaaag
tataagccaaaactggttcgttatgtaaaactaggagccagtttttcttcagaaacggca
cttcaacaattattagaaaatctaaatagagcaccaaaacaacgtcaggtcattttaacg
ttgttttctgtttctgctactacaaaaaagcctgtaaaagtttcagatctatcttcagaa
agtggcgcatcaacggcggttataaaatcattgattgataaaggcattcttgaggaatac
tatattcaaacagatcgtgttcaatattcaggagaagacaatgaggctactaaaaatctt
aatgagtatcaagaaacagctctaaaagaaataaagaacgcttttgttaaacatgcggtt
gtattgttgcatggagtgacttcttctggtaaaaccgaagtatatgttaagttaattgaa
gatactataaatcaaggaaagcaagtgctctatttattgccagaaatagcattaacagca
cagttaattacacgattacaaaattatttcggagagcaggtcgctattttccattccaaa
tattcatctcaggaacgtgttgaggtttggaatcatgtcttaaataatactgtaaaagca
aaaatagttttaggggcacgttcttctatctttttaccgtttgataatctaggtcttatt
gttgttgatgaggagcatgagcaatcttttaagcagtttgatcctgcaccacgttaccat
gcacgcgatacggctgtggtattagcaaatatgcacggggcaaaaatacttttaggttct
gcgacaccaagtttagaaagttactttaatgccaagcaaaataagtatggttttgtagaa
ataactaaacgctataatgatgttttgatgccggatatagaactagttgatattaaagaa
aagtttaaaaagaaattaatgaaagggcattttagcgatagacttatcgaagaaatgaca
gaaacattaagggaagggcatcaaattatattatttcaaaacagacgtggattttctcct
attgtagaatgtaacacctgcggtaattcgccacagtgtcctaattgcgatgtgagttta
acctatcaccaatatagaaaccaattacgttgtcactattgtggttataattcggctatg
ataaaagattgtatggcttgcggaagttctgaattagacactaaaggatttggaaccgaa
caaattgaagaagaggtgaaattattgtttccagattataaagtagcacgtatggattta
gataccacaagaggtaaatatggctatgaaaagatcatcacagctctggagcagcaagaa
atagatattttagtaggaacgcaaatgctaacaaaggggttggactttagaaatgtaaaa
ctggttggtattatgaatgcagataatatgcttaattttcctgattttagagcacacgaa
cgaagttttcaattgatgttacaagtctctggcagggcagggcgtacagatgagagaggg
aaagtgttaatacaaacctataacccgtatcataacatactgcaacaactatctactaat
aactatgtagagatgtttaacgaacaaatgaacgagcgttataattataaatatccgcct
gtttacaaacaaataaaaatcactttaaagcacaaagattataatagggtagatacagct
tcggtttggtttgcaaagtctttaaggcaattttttaaagataatgtcttgggaccggag
tcaccaccaatttctagaataagaaatcaatttcataaaaatattctggtcaagattcca
aaggagcattcgttatcaaaaacaaaaaaagctatcattaaagtaaataatagcttttca
agtataaaagattttcggtcggttaaaataattttaaatgtcgataacttttaa
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