Flavivirga abyssicola: Q4Q34_01295
Help
Entry
Q4Q34_01295 CDS
T09912
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fay
Flavivirga abyssicola
Pathway
fay03030
DNA replication
fay03430
Mismatch repair
fay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q4Q34_01295
03430 Mismatch repair
Q4Q34_01295
03440 Homologous recombination
Q4Q34_01295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fay03032
]
Q4Q34_01295
03400 DNA repair and recombination proteins [BR:
fay03400
]
Q4Q34_01295
Enzymes [BR:
fay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q4Q34_01295
DNA replication proteins [BR:
fay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q4Q34_01295
DNA repair and recombination proteins [BR:
fay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q4Q34_01295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Peptidase_M9
T4_Spackle
Motif
Other DBs
NCBI-ProteinID:
WVK13674
LinkDB
All DBs
Position
complement(305869..306645)
Genome browser
AA seq
258 aa
AA seq
DB search
MQLSLTKPICFFDLETTGINISKDRIVEISILKVFPNGTEESKTWLVNPEMTIPKEVIEI
HGITNEKVANEPTFKELAKEIYNMIKDSDLGGFNSNRFDIPLLAEEMLRADIDFDMKNRL
AIDVQTIFHKMEQRTLSAAYKFYCDENLDGAHSAEADTKATYEVLKAQIAKYEEVENNTK
FLAEFSSRKKFADFAGFIAYNKEGVECFSFGKHKGKLVTEVLEKEPGYFGWLLNADFPLY
TKKVLTSIKLRSFNNKLG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcagttaagcctcaccaaacccatttgtttcttcgatttagaaacaacagggataaac
atatcaaaagatcggattgttgaaatttctattcttaaagtgttccctaatggaacggaa
gaaagcaaaacatggttggtaaatccagagatgaccatacccaaagaggtcatagagatt
catggtattaccaatgagaaagttgctaacgaaccaacatttaaagaacttgccaaagaa
atttataacatgattaaagattcagatctaggtgggtttaattccaatagatttgatatt
cctttattagcagaagagatgttgcgagcagatattgattttgatatgaaaaatcgcctg
gctatagatgtacaaactatttttcataaaatggaacaacgtactttaagtgctgcgtat
aaattttactgtgacgaaaatctggatggtgcacacagtgcagaagcagacactaaagcc
acttacgaggtcttaaaagcacaaatagctaaatatgaggaggtagaaaataacacgaag
tttttagctgagtttagttcaagaaaaaagtttgcagattttgcaggttttatagcatac
aataaagaaggtgtggagtgtttttcttttggaaagcacaaaggtaagttagttacagaa
gtattggaaaaagaaccaggatattttggatggttattaaatgcggactttcctttatac
accaaaaaagtactaacaagtattaaacttaggagttttaataataaattagggtaa
DBGET
integrated database retrieval system
