Flavivirga abyssicola: Q4Q34_04135
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Entry
Q4Q34_04135 CDS
T09912
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fay
Flavivirga abyssicola
Pathway
fay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q4Q34_04135 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fay03019
]
Q4Q34_04135 (groL)
03110 Chaperones and folding catalysts [BR:
fay03110
]
Q4Q34_04135 (groL)
03029 Mitochondrial biogenesis [BR:
fay03029
]
Q4Q34_04135 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fay04147
]
Q4Q34_04135 (groL)
Enzymes [BR:
fay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Q4Q34_04135 (groL)
Messenger RNA biogenesis [BR:
fay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Q4Q34_04135 (groL)
Chaperones and folding catalysts [BR:
fay03110
]
Heat shock proteins
HSP60 / Chaperonin
Q4Q34_04135 (groL)
Mitochondrial biogenesis [BR:
fay03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Q4Q34_04135 (groL)
Exosome [BR:
fay04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Q4Q34_04135 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Q4Q34_04135 (groL)
Exosomal proteins of breast cancer cells
Q4Q34_04135 (groL)
Exosomal proteins of colorectal cancer cells
Q4Q34_04135 (groL)
Exosomal proteins of bladder cancer cells
Q4Q34_04135 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
WVK14216
LinkDB
All DBs
Position
1046143..1047777
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPQVTKDGVSVAKEIE
LENPHENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVGAITENLEKQSKQVGNSSEKIKQVAAISANNDDTIGELIAQAFTKVGKEGVITVEEA
KGMETYVDVVEGMQFDRGYLSPYFVTDADKMIADLENPYILLFDKKISNLQEILPILEPV
AQSGRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENADLSMLGTAETVTVDKDNTTIVNGAGVAKDIKARVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKSVLEKITTENLDEVTGIQIVARAIESPLRTIVENAGGEGSVVISKVLEGKKDFGYDA
KSEAYVDMLKAGIIDPKKVTRIALENAASVAGMILTTECALIDIKEDAAPAMPPMGGGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaattcgatattgaagcacgtgacggtttaaaacgcggtgttgat
gcattagccaatgcagtaaaagtaactttaggtcctaaagggcgtaatgtaattattagc
aaatctttcggagcaccacaagtaactaaagatggcgtttctgtagctaaagaaattgag
ttagaaaacccgcatgaaaacatgggagctcaaatggtaaaagaagtggcttctaaaacc
aatgatttagcaggagacggaactactacagctactgttttagcacaagctattgtaaaa
gaaggtttaaagaatgttgctgctggtgcaaatccaatggatttaaaacgtggtattgat
aaagctgttggtgctattactgaaaatttagaaaaacaatctaagcaagttggtaattct
tctgaaaaaataaaacaagttgctgcaatttctgctaataatgatgacactattggagag
ttaattgctcaagcatttactaaagttggtaaagaaggtgttattactgttgaagaagct
aagggtatggaaacatacgttgatgttgttgaaggcatgcaatttgatagaggatactta
tcgccttactttgtaacggatgctgataaaatgattgccgatttagaaaatccatacatt
ttattatttgacaaaaagatttctaacttacaagaaattcttccaatcttagagcctgta
gcacaatctggacgccctttattaattattgctgaagatgttgacggacaagccttagct
acattagtggtaaataaattacgtggtggacttaaaattgcagctgttaaagctcctggt
tttggtgacagacgtaaagccatgctagaagatattgctatcttaactggtggtactgtt
atttctgaagaaagaggatttactttagaaaatgcagatttaagcatgttagggactgct
gaaactgtaacggttgataaagacaatactacgattgttaatggtgctggtgttgcaaaa
gacattaaagctagagttaaccaaattaaagctcaaattgaaacaaccactagcgattac
gataaagaaaaactgcaagagcgtttagctaagttagctggtggtgttgctgttctttat
gttggtgctgctagtgaagtggaaatgaaagagaaaaaagaccgtgttgatgatgcgtta
cacgcaactagagctgctgttgaagaaggcattgttgctggtggtggtgttgctttagta
agagcaaaatctgtattagaaaagataacaactgaaaacttagatgaagtaacaggaatt
caaattgtagcacgtgctattgagtctcctctacgtactattgttgaaaacgctggtgga
gaaggcagtgttgttatttctaaagttttagaaggtaaaaaagattttggttacgatgcc
aaatctgaagcctatgtagatatgcttaaagctggtattatagatcctaagaaagtaaca
cgtattgcattagagaatgcagcgtctgttgctggaatgattcttactaccgagtgtgca
ttaatcgatattaaagaagacgcagcgccagctatgcctccaatgggtggcggtggtatg
ccaggaatgatgtag
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