Flavivirga abyssicola: Q4Q34_05460
Help
Entry
Q4Q34_05460 CDS
T09912
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
fay
Flavivirga abyssicola
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fay03400
]
Q4Q34_05460
DNA repair and recombination proteins [BR:
fay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Q4Q34_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
WVK14474
LinkDB
All DBs
Position
1329007..1329483
Genome browser
AA seq
158 aa
AA seq
DB search
MSYEYKKIKVPRFDEASGFYTTKKRSKMMSKIRGKNTKPEMRFRKALWKKGVRYRVDSKQ
LPGRPDVSIKKYKLAIFIDGEYWHGYNWYERKKKLKTNRDFWIPKIERNIQRDKEVNQQL
ENMGYTIFRFWANEIKTNLKTCINDVMVYLDIERFKIS
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacgaatacaaaaaaataaaagtccccagattcgatgaagcatctggtttttat
accacaaagaaacgctctaaaatgatgagcaaaattcgtggtaaaaataccaagccagaa
atgcgttttcgtaaagcgctttggaaaaaaggtgttcgatacagagtggatagtaaacaa
cttccaggccggccggatgtaagtataaaaaaatataagcttgctatttttatcgatggc
gaatattggcatggttataactggtatgaacgtaagaaaaagctaaagacaaatcgtgat
ttctggatacctaagatcgaaaggaatatacaacgagacaaagaagtcaatcaacaatta
gaaaatatgggttataccatatttcgattttgggcaaacgaaataaaaaccaatctaaaa
acttgtattaacgatgttatggtatatttagatatcgaaaggttcaaaattagttaa
DBGET
integrated database retrieval system
