Flavivirga abyssicola: Q4Q34_09495
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Entry
Q4Q34_09495 CDS
T09912
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fay
Flavivirga abyssicola
Pathway
fay03030
DNA replication
fay03410
Base excision repair
fay03420
Nucleotide excision repair
fay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q4Q34_09495 (polA)
03410 Base excision repair
Q4Q34_09495 (polA)
03420 Nucleotide excision repair
Q4Q34_09495 (polA)
03440 Homologous recombination
Q4Q34_09495 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fay03032
]
Q4Q34_09495 (polA)
03400 DNA repair and recombination proteins [BR:
fay03400
]
Q4Q34_09495 (polA)
Enzymes [BR:
fay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q4Q34_09495 (polA)
DNA replication proteins [BR:
fay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Q4Q34_09495 (polA)
DNA repair and recombination proteins [BR:
fay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Q4Q34_09495 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q4Q34_09495 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
WVK15260
LinkDB
All DBs
Position
complement(2236610..2239462)
Genome browser
AA seq
950 aa
AA seq
DB search
MSDQKRLFLVDAYALIFRGYYAFIKNPRINSKGTDTSAILGFMNSLLDVIKRERPDHLAV
CFDKGGSVDRVEMYQEYKANRDETPEAIKVAIPYIYNILKAMHIPIMVKEGYEADDVIGT
LSKQAEKEGYKTFMVTPDKDFAQLVSENIFMYRPVFGGGYETWGIPEVQKKFEVTDPLQV
IDFLGMMGDSSDNIPGLPGVGEKTAKKFLAQYGSMENLLANTHELKGKMKEKIEANGELG
RLSKKLATIMLDVPVTFDAKDFELDHPNIPKVTEIFQELEFRRLIDNFNKTFATGSDTSQ
TNTTAKQTETKATPKEQASAGSGQFSLFGGEDSTNETDTETSSAFQRKTAETTSHFYQSV
DSGIATKLFIKNLMNQTSVCFDTETTGLNPITAELVGIAFSWEVGKGFYLPFPEDKTEAQ
DLIEQLRPFFENEGIQKIGQNLKYDIKVLAKYNVEVKGKLFDTMLAHYLINPDMRHNMDV
LAETYLNYTPISIETLIGKKGKNQLLMRDVPLEKQTEYAVEDSDITLQLKEHFEKELGEA
NTQKLFDDIEVPLLRVLAAMELEGINLDKKFLETLSEELNNDIASLETKIYEAAGEEFNI
ASPKQLGIILFEKLKLVDKPKKTKTGQYATSEDILSYLAKEHDIIQNILDYRGLAKLKST
YVDALPSQVEESTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRNEE
YTLLAADYSQIELRIIAALSEEETMISAFKNGEDIHASTASKVFNVPLDKVTREQRSNAK
TVNFGIIYGVSAFGLSNQTDLSRSESKELIDTYYATYPKLRNFISEQVDFARDNGYVQTV
LGRRRYLKDINSRNAVVRGAAERNAVNAPIQGSAADIIKIAMINIYDKLSKGNYKSKMLL
QVHDELVFDVYKPELETIKSLVKTEMENAYTLAVPLDVDLDTGDNWLEAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcaaaaacgtcttttcttagtagatgcctatgctttaatttttcgtggttat
tatgcctttattaaaaaccctagaattaactcaaaaggtacagatacttcagctatttta
ggttttatgaattcgcttttagatgttattaagcgagaacgacccgaccatcttgctgtt
tgttttgataaaggaggaagtgtagatagagttgagatgtatcaagaatataaggcgaat
agagatgaaacacctgaggccattaaagtggctattccttatatttataacatccttaag
gctatgcacattcctattatggttaaggaaggttatgaagccgatgatgttattggaaca
ctttccaagcaagccgaaaaagaaggttataaaacgtttatggtaactccggacaaagat
tttgcacaattggtatctgaaaatattttcatgtaccgccctgtttttggtggaggttat
gaaacctggggtattccggaagtacagaaaaaattcgaggttaccgatcctttacaagtc
attgactttttgggaatgatgggggattccagtgacaacattcctgggcttcctggtgtt
ggtgaaaaaacagccaaaaagtttttagcacaatatggcagtatggaaaaccttttagcc
aacacccatgagttgaaaggtaagatgaaagaaaaaattgaagccaatggagagttaggg
cgtttatccaaaaaattagcaacaatcatgttagatgtacctgtaacttttgatgctaaa
gattttgaattagaccaccctaacatcccaaaagtcaccgagattttccaagaattagag
tttagacgcttaattgacaatttcaacaaaacatttgctacaggcagcgacacttcacaa
actaatactacggcaaaacaaacagaaacaaaagcgacacccaaagaacaagcctctgca
ggttctggacaattttctttgtttggaggagaggactctactaatgagacggatactgaa
acaagttcagcatttcaaagaaaaacagcagaaacaacatctcatttttatcaaagtgta
gactcaggaattgctacgaaactcttcattaaaaatttaatgaatcaaacgtccgtatgt
ttcgatacagaaactacaggtttaaatcctattacagcagaattggtcggtattgccttt
tcttgggaagtaggtaaagggttttatttaccattccctgaagataaaacagaagcacaa
gaccttatagaacagttacgtccgttttttgaaaatgaaggtattcagaaaattggtcag
aatttaaaatatgatattaaagttctggctaaatataatgttgaagttaaaggtaaattg
tttgacaccatgttagcacattacctcattaatccagatatgcgacataatatggatgtg
ttagcagaaacgtatttaaattacacgcctatttctatagaaactcttatcgggaaaaaa
ggaaaaaatcaattattaatgcgagatgttcctctagaaaaacaaactgaatatgcggtt
gaagattcagatataacacttcaattaaaagaacattttgaaaaagaattaggtgaggcg
aatactcaaaaacttttcgatgacattgaagtaccattacttcgcgtattggcagcaatg
gaattagaaggtatcaatctggataaaaaattccttgagacactctcggaagaattaaac
aacgatattgcttcattagaaacaaaaatttacgaggctgcaggtgaggaatttaacatc
gcatcgccaaagcaactagggatcatactttttgaaaaattgaaacttgtagataaacct
aagaaaactaaaacaggccaatatgcaacttctgaagatattttatcttatttagcaaaa
gagcatgatatcattcaaaatattttagactatagaggcttagcgaaattaaaaagtact
tatgtcgatgctttgccaagtcaagttgaagaatcaaccggccgtgtgcacaccgactat
atgcagacagttgcggcaaccggaaggttaagtagtaataatccgaatcttcaaaatatc
cctattcgtacagaacgtggtagacaggtaagaaaggcttttattccaagaaacgaagaa
tatacacttttggctgcggattattctcaaatagaactccgcattattgctgctttaagt
gaagaagaaactatgatttctgcatttaaaaatggagaagatattcacgcatctacagct
tcaaaagtatttaatgttcctttagacaaagtaactcgcgaacaacgtagtaatgctaag
acggttaattttggaattatttatggcgtttctgcctttggattaagcaatcaaacagat
ttatctagaagtgaatccaaagaacttatagatacatattacgcaacgtatccaaaactt
agaaactttattagcgaacaagtcgattttgccagggacaatggttatgtacaaaccgta
ttaggacgtcgtcgttacttaaaagatattaattcaagaaatgctgttgttagaggtgct
gctgaaagaaatgctgtaaacgctcctatacaaggaagtgctgccgatattattaaaatt
gccatgattaatatttatgacaaactctctaaaggaaactataaatctaaaatgctttta
caggtgcatgatgaattggtttttgatgtatataaacccgaattagaaaccatcaagtct
cttgttaaaacagaaatggaaaacgcttatactttagctgttcctttagatgttgattta
gatactggcgataactggctggaggcgcattaa
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