Flavivirga abyssicola: Q4Q34_09575
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Entry
Q4Q34_09575 CDS
T09912
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
fay
Flavivirga abyssicola
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fay03021
]
Q4Q34_09575 (nusA)
03009 Ribosome biogenesis [BR:
fay03009
]
Q4Q34_09575 (nusA)
Transcription machinery [BR:
fay03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Q4Q34_09575 (nusA)
Ribosome biogenesis [BR:
fay03009
]
Prokaryotic type
rRNA transcription factors
Q4Q34_09575 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
KH_1
S1_2
KH_KhpA-B
Myosin_VII_N
Motif
Other DBs
NCBI-ProteinID:
WVK15275
LinkDB
All DBs
Position
2261168..2262400
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AA seq
410 aa
AA seq
DB search
MENIALIESFSEFKDDKLIDRVTLMAILEDVFRSALKKKYGDDDNFDIIVNPDKGDLEIW
RNRVVVGDGEVEEPNQEISLTEARKIEPDFEVGEDVSEEVKLIDLGRRAILALRQNLISK
IHEHDNTIIYKQFKDLIGEIYTAEVHHIRHRAVILLDDEGNEIVLPKDRQIPSDFFRKGD
NVRGVIDAVELKGAKPTILMSRSSPVFLEKLFEQEIPEVFDGLITIKNVVRIPGEKAKVA
VDSYDDRIDPVGACVGMKGSRIHGIVRELGNENIDVINYTNNLQLYITRALSPARVTSIK
LNEETKRAEVILKPEEVSKAIGRGGHNIRLAGQLTGYEIDVFREGAEEDVELREFSDEIE
GWIIEEFSKAGLDTAKSILEQEVNDLVKRTDLEEETINEVIRILKEEFEE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatcgcgttaattgaatctttttcagaattcaaagacgataagctaattgac
agagtaacgttaatggcaattttagaagatgtatttaggagcgccttaaaaaagaagtat
ggcgatgatgataattttgatattattgtaaacccagataaaggagatttagaaatttgg
agaaatagagtcgtagtaggagatggagaagttgaagaaccaaaccaggaaatttctttg
actgaagctcgaaaaattgagcccgattttgaagtaggagaagatgtatctgaagaagta
aagctgattgatttaggaagaagagctattttagcattacgtcaaaatttgatttctaaa
attcatgagcacgataacaccataatttataaacaatttaaagatttaataggagaaatt
tatacagctgaagtacaccatattcgtcacagagcagttattttgttggatgatgaaggt
aacgaaattgtattaccaaaagatagacaaataccttcagacttttttagaaaaggagat
aatgtaagaggtgttattgatgctgttgagcttaaaggagcaaaaccaactattttaatg
tctagaagctctcctgtgtttttagagaaattatttgaacaagaaataccagaggttttt
gatggtttaattacgattaaaaatgtagtaagaattccaggagaaaaagcaaaagtagcg
gtagattcttatgatgatagaatagatcctgttggagcttgtgttggtatgaaaggttca
agaattcatggaattgttcgcgaattaggtaatgaaaatatagatgtaataaattataca
aataatttacaattatacataacaagagcattaagtcctgcaagagtgacttcaataaaa
ttgaatgaagaaacaaaaagagcagaagttattttaaaaccagaagaagtaagtaaagcg
attggtagaggcggacataatatccgtttagcaggtcaattaactggttatgagattgat
gtgtttagagaaggtgcagaagaagatgtagaattaagagaattctctgacgaaatagaa
gggtggattattgaagagtttagtaaagctggattagatactgctaaaagtattttagag
caagaagtaaacgatttagtaaaaagaacagacttagaagaagaaacaattaatgaagtt
attagaattttgaaagaagaattcgaagaataa
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