Flavivirga abyssicola: Q4Q34_13640
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Entry
Q4Q34_13640 CDS
T09912
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fay
Flavivirga abyssicola
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fay03016
]
Q4Q34_13640 (truA)
Enzymes [BR:
fay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Q4Q34_13640 (truA)
Transfer RNA biogenesis [BR:
fay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Q4Q34_13640 (truA)
Prokaryotic type
Q4Q34_13640 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DcpS_C
DUF5642
DUF2344
Motif
Other DBs
NCBI-ProteinID:
WVK12263
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All DBs
Position
3234547..3235296
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AA seq
249 aa
AA seq
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MRYFIELSYNGAAYHGWQNQPNDISVQEVVEKALSVLLKETISIMGAGRTDTGVHASQMF
AHFDTHVVFNEVNVVYKLNSYLPKDIAIRNIFKVKEETHARFDAKSRTYLYRIALKKDVF
SFDNSFYVKQDLNVEKMNEASELLFRYKDFQCFSKSNTDVKTYYCDIMKAKWTIENNELH
FVIKADRFLRNMVRAIVGTMINIGLGKIDVEDLHTIIKSKNRSEAGFSVPAHGLYLTEVE
YPNDIKIHE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttgaggtattttatagaactttcttataatggtgctgcgtatcatggctggcaaaatcaa
cctaacgatatctcagtacaagaagttgttgaaaaagcgttatccgtgcttttaaaagaa
actatatcaattatgggagctggtcgtacagatactggtgtacacgcatctcaaatgttt
gctcattttgatactcatgtcgtttttaacgaagtgaatgtcgtttataaattgaattct
tatttaccaaaagatatcgcgattcgtaatatttttaaagtaaaagaagagacgcatgct
cgttttgatgcaaaaagcagaacttatttatatagaatagcactaaaaaaggatgtgttt
tcgtttgataatagtttttatgtgaagcaagatctgaatgttgaaaaaatgaatgaagct
tcagagcttttatttaggtataaagattttcaatgcttttcaaaaagtaataccgatgta
aaaacgtattattgcgatattatgaaagcaaaatggactatagaaaataatgaacttcat
tttgtgataaaagcggatagatttttacgtaatatggtacgtgccattgttggcactatg
attaatattggtttgggaaaaattgatgttgaagatttacacaccattataaagtctaaa
aatagaagtgaagctgggttttctgttcctgctcacgggttatatttaacagaagtagaa
tatcctaacgatataaagatacatgagtaa
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