Flavivirga abyssicola: Q4Q34_15130
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Entry
Q4Q34_15130 CDS
T09912
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fay
Flavivirga abyssicola
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fay03032
]
Q4Q34_15130 (gyrA)
03400 DNA repair and recombination proteins [BR:
fay03400
]
Q4Q34_15130 (gyrA)
Enzymes [BR:
fay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Q4Q34_15130 (gyrA)
DNA replication proteins [BR:
fay03032
]
Prokaryotic type
DNA Topoisomerases
Q4Q34_15130 (gyrA)
DNA repair and recombination proteins [BR:
fay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q4Q34_15130 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Motif
Other DBs
NCBI-ProteinID:
WVK12550
LinkDB
All DBs
Position
3579046..3581622
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AA seq
858 aa
AA seq
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MAEGEKLIPINIEDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMHELGVRASS
AHKKSARIVGEVLGKYHPHGDTSVYDAMVRMAQEWSLRYMLVDGQGNFGSIDGDSPAAMR
YTEARMQKISEDMLADIEKETVDHKLNFDDTLQEPTVLPTRIPGLLVNGASGIAVGMATN
MPPHNLTEVVNGTIAYIDNNDIEIDELITHIKAPDFPTGGTIYGYDGVKEAFHTGRGRIV
MRAKANIEEVNGRECIIVDEIPYQINKADMIKKTADLINDKKLEGISTIRDESDRNGMRI
VYVLRRDAIPNIVLNKLFKFTALQSSFSVNNIALVNGRPQLLNLKELIHYFVEHRHEVVV
RRTTYELRKAEERAHILEGLIIASDNIDEVIAIIRASSNADEARENLIKRFELSEIQAKA
IVEMRLRQLTGLEQDKLRSEYEEIMKTIEDLKDILAKKERRMDIIKEELEVVRNKYGDER
RSTIEYAGGDLSIEDMIPDEKVVITISHAGYIKRTSLTEYKTQNRGGVGQKASTTRNEDF
LEHLFVGTNHQYMLFFTQKGKCFWMRVYEIPEGSKTSKGRAIQNLINIEQDDKVMAFICT
QDLKDEDYINSHYVIMATKNGQVKKTSLEQYSRPRTNGINAITIKDNDELLEAKLTTGNS
QVMLALKSGKAIRFEEAKTRPMGRGASGVRGIRLANDKDEVIGMVTIENSQEESVLVVSE
NGYGKRTYIDDPEDGEPVYRITNRGGKGVKTISITEKTGNLVAIKSVTDNDDLMIINKSG
IAIRMVVADLRVMGRATQGVKLINLKGNDSIAAVAKVMHDEDEVEDSETIENTNDLEDGT
TLDNNVEDNNDNTDNTEN
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggagaaaaattgatccctattaatattgaggatgagatgaaatcggcatac
attgattattcaatgtcagtcattgtgtcacgtgctttaccggatgtaagggacggctta
aaaccagttcatagacgtgtactttatggtatgcacgaattgggtgttagagcgagttca
gcacataaaaaatccgcaagaatagttggagaagttttaggtaagtatcaccctcatgga
gatacatctgtttatgatgcgatggtacgtatggctcaggaatggagtttgcgttatatg
ctggtcgacggacaagggaattttggttctatagatggtgatagtccagcagcaatgcgt
tacacagaagcacgtatgcaaaaaatatctgaggacatgttggcagatatagaaaaggaa
acggtagatcataaattaaattttgatgatactttacaggaacctactgttttaccaact
cgtatcccagggcttttagttaatggtgcgtctggtattgctgtaggtatggctacgaac
atgccacctcacaatttaaccgaagtggttaatggtactatagcttatattgataataat
gatattgaaattgatgaattaatcacccatattaaagctccggattttccaacaggagga
accatttatggttatgatggtgtaaaagaagcatttcacacaggtcgcggacgtatcgtt
atgcgtgctaaagccaatattgaggaagtaaacggacgtgagtgtattatagtagatgaa
ataccttatcagattaataaggcagatatgattaaaaagactgctgacttgattaatgat
aagaaattagaagggatatccactattcgtgatgaatccgatagaaatggtatgcgcatt
gtttatgttttaaggcgtgatgctattcctaatatcgttttaaataagctatttaaattt
acagctttacaatcatcttttagtgtaaataatattgcattggttaatggtcgaccacag
ctattaaacttaaaagaactgattcattattttgttgagcatagacacgaagttgttgta
agacgtactacttacgaattacgaaaggctgaagaacgtgctcatatattagaaggctta
attattgcatcagacaatattgatgaagttattgctataatcagggcttcttctaatgca
gatgaagctagggaaaacttaataaaacgttttgaactttctgagattcaggctaaagct
atagttgaaatgcgactgcgccagttaactggtttagagcaagataaactgcgttcagaa
tatgaggaaataatgaaaaccattgaagacttaaaagatatcttggctaaaaaagagcgt
agaatggatattattaaggaagagttggaagttgttaggaataagtatggtgatgagcgt
cgttcgactattgagtatgctggtggagatttgagtattgaagatatgattcctgatgaa
aaagtggtgattaccatttctcatgcgggttatattaaacgtacatcactaacagaatat
aaaacacaaaatagaggcggagttggtcaaaaagcatctactacaaggaatgaagatttc
ttagagcatctgtttgttggtactaatcatcaatacatgttgttctttacgcaaaaagga
aaatgtttctggatgcgtgtttatgaaatccctgaaggaagcaagacttctaaagggaga
gcgattcaaaacttgataaatattgagcaagatgataaggtgatggcttttatttgtact
caagatttaaaagatgaagattatattaatagtcattatgtaatcatggctactaaaaat
ggtcaagtaaagaaaacctctttagagcagtattctcgtcctagaacaaatggaattaat
gctataacaattaaggataatgatgaattgttagaagcaaaattaaccacaggaaatagt
caagttatgcttgcacttaaatctggtaaagcgattcgttttgaagaagcaaaaaccaga
cctatgggacgtggtgcttctggagttagaggtattagacttgctaacgataaggatgag
gttataggtatggtaactatagaaaattctcaagaagaatctgtacttgtggtttcagag
aatggttatggtaaacgtacttatattgatgatcctgaagatggagagccagtatataga
attacaaatagaggtggaaaaggagtaaaaaccatttctattacagagaaaacaggaaat
ttagttgctataaaaagcgtaacagataatgatgatttaatgattattaataaatcaggt
atcgctatacgtatggttgtggcagatttacgagttatgggtagagccactcaaggtgtt
aaattaatcaatttaaaaggaaatgattctatagcagcagttgctaaagttatgcatgat
gaagatgaagttgaagattccgaaactattgaaaacactaacgatttagaagacggcaca
actcttgataataatgtagaagataataacgataataccgataataccgaaaattaa
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