Flavivirga abyssicola: Q4Q34_15235
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Entry
Q4Q34_15235 CDS
T09912
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fay
Flavivirga abyssicola
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fay02000
]
Q4Q34_15235
Transporters [BR:
fay02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Q4Q34_15235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_14
Motif
Other DBs
NCBI-ProteinID:
WVK12569
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Position
3604881..3606608
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AA seq
575 aa
AA seq
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MKNIKSLLLLLIISSMFGACEDILETKPLNRYSEENVWGDPALAQGFIYDAQNDAIRAFL
SVPASSTLYSANDLHTDNQIRTGGGGNINTDGYDRFFDAGWDQFSVIRQANLIIEKVTES
TIFTENQKTLFIAQGHMIRAMVYARQARFFGKYIIIDKVLTPEDDLVLGRSSTVKETYDF
ILNDLTIAANGLPLNGEAGMLTKGAALALKAEVALHGGAYIESNKEEYYQISKEAGEDLF
NLGVYQLDNDYANIFNNYDGGLNSNEIILGYYQHIDNTRFRETIMQRIVPNLALSRLDTN
ATPQLSQGFSGWSRMQPTWSLVEDYLVVDEDNVAKKWNETSYYQDYMTNGGYVSKMLFKN
RDKRLEASIVRDSSMYFGQLVTYRKGGNLHWNANTGSKWGMTASGFNQRKGLYEEVQLRA
PVNTPYHIVVFRLGRAYLNYAEAMLRLNQPDVAIEYMNRTRTAHGGLPPLAIGTDISDVW
KYFKIERRVDLFFENDRYWSLLRWGKEDGGTIISELNTNKKAFEISEDGMSFELIEIPNG
YANRNRMNFSARRYLFPVPENERQLNNKLDQNPEW
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatataaaaagcttattactattattgataatatcttccatgttcggtgcctgt
gaagatatacttgaaacgaaacctttaaacaggtattcagaagaaaatgtttggggagat
ccagctcttgctcaagggtttatttatgatgcacaaaatgatgctataagagcatttttg
agtgtgccagcaagttccactttgtattctgcaaatgatttacatacagacaaccagatt
agaactggaggaggaggaaatattaatacagatggctacgatcggttttttgatgcaggt
tgggatcagttctctgtaataagacaagctaatttaattattgaaaaagtaactgaatca
acgatatttactgaaaatcaaaagactctttttattgctcaaggacacatgatccgtgct
atggtctatgcacgtcaagcacggttttttggtaaatatattattatagataaagtgctt
actccagaagatgacttagttctaggtcgttcttcaaccgttaaagaaacgtatgatttt
attttaaatgatttaactattgcagccaacggcttgccattgaatggggaagcaggaatg
ttaaccaagggtgctgctttagcccttaaagcagaagttgcattacatggcggtgcatat
attgaaagcaataaagaggagtattaccaaatatctaaggaagctggtgaagatttattt
aatttaggagtataccaattagataacgattatgcgaacatttttaataattacgatgga
ggcttaaattctaatgagattattttgggatattatcagcatattgataatacacgtttt
agagaaaccattatgcagcgtattgtgcctaatttggctctcagtaggctagatactaat
gcgacacctcaactaagtcaaggtttttccggatggagtcgtatgcaaccaacttggtca
ttagttgaagattatttagttgtagatgaagataatgtcgcaaagaaatggaatgaaacg
tcatattatcaagattatatgacaaatggtggatatgtttcaaagatgctttttaaaaat
agagataagcgtttagaagcttcaattgtgagagattcatcgatgtattttggtcagttg
gtaacctatcgtaaaggcggtaatttacattggaatgccaatacaggttcaaaatggggc
atgacagcatctggatttaatcaaagaaaggggttgtatgaagaagtacagttaagagct
cccgttaacacaccatatcatattgttgtattcaggcttggtcgcgcatatttaaactat
gcagaagctatgttgcgccttaatcaacccgatgttgctattgaatatatgaatagaaca
agaactgctcatggcggcttgccaccactggcaataggtactgatatatcagatgtatgg
aaatattttaaaattgagcgcagagttgatttattctttgaaaatgatcggtattggtca
ttgttgcgttggggaaaagaagatggaggtacaattatttccgagttaaatactaataag
aaagcttttgaaatttcagaggacggcatgtcgtttgaacttattgaaatcccaaatgga
tatgccaatagaaacagaatgaatttttctgcaagaagatatctttttcctgtaccagaa
aatgagagacagttgaataataaactagaccagaaccctgagtggtaa
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