Flavivirga abyssicola: Q4Q34_15405
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Entry
Q4Q34_15405 CDS
T09912
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
fay
Flavivirga abyssicola
Pathway
fay00730
Thiamine metabolism
fay01100
Metabolic pathways
fay01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Q4Q34_15405 (thiC)
Enzymes [BR:
fay01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Q4Q34_15405 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WVK12603
LinkDB
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Position
complement(3647918..3649777)
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AA seq
619 aa
AA seq
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MKTKDTAPKEGTISRNPFPNSKKIYVQGDIHPNIQVAMREIALSDTKDAMTGKLTPNEPV
TVYDTSGPYTDPNKDIDIHKGIDPIRKQWILDRNDVEELNQFTSTYSNERLNDPTLDHMR
FSLLKKPLRAKEGQNVTQLHYAKQGIITPEMEYIAIRENQRIDEMTEISKQHKGEHFGAS
IPSKITAEFVRSEVARGRAVIPSNINHPEAEPMILGRNFLVKINANIGNSAVISSIEEEV
EKAVWACRWGADNIMDLSTGENIHETREWIIRNSPVPVGTVPIYQALEKVNGVAEDLTWE
IFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAHHKENFLY
THFEDICAILKQYDVAFSLGDGLRPGSVADANDEAQFAELETLGELTKIARKQEVQCFIE
GPGHVPMHMIKENMEKQIEVCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAML
CYVTPKEHLGLPNKDDVRTGVVTYKLAAHAADLAKGHPGSQHRDNALSKARFEFRWEDQF
NLGLDPELARAYHDETLPADGAKIAHFCSMCGPKFCSMKISQEVRNFAAENDIIDDEVVQ
KGMEEKSKEFKEKGSEVYL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaagacacagctccaaaagaaggaacaatttcaagaaatccgtttcctaat
tctaaaaaaatctatgtacagggtgacatccacccaaacatacaagtagccatgagagaa
attgctcttagcgataccaaggatgcgatgacggggaaattaaccccaaatgaaccagta
accgtatatgacacttcgggtccatatacagatccaaacaaggacattgatattcataaa
ggcatcgatcctattcgtaaacaatggatcttagatcgcaatgatgtagaggaattaaat
caatttacttctacatacagtaacgaacgcttaaatgacccaacattggatcatatgcgt
ttttccttactcaaaaagcctctgcgtgctaaagaaggccaaaatgtgacccaattacat
tatgcaaaacagggtattataactccagaaatggaatacattgccattcgtgaaaatcag
cgaattgatgaaatgacagagatcagcaagcaacataaaggagaacactttggtgcttca
attccttctaagatcacagctgaattcgttcggtctgaggtagccagaggtcgtgcagtt
attccatcaaatattaatcacccagaagcagaacccatgattttgggaagaaactttctg
gtaaaaatcaatgccaatattggtaattctgccgtaatatcttccattgaagaagaagtt
gaaaaagctgtttgggcttgtagatggggtgcagataatatcatggatttatctacaggt
gaaaacattcatgaaacccgagaatggattattagaaattctcctgtacctgttggaact
gttcctatttatcaagctttagaaaaggtaaatggtgttgcagaagatttaacatgggaa
atttttagagatacattgatagagcaagcagaacaaggtgttgattatttcaccatccat
gcaggtgtattgttgagatatgtccctatgactgctaaacgtgttacaggaatcgtttct
cgaggcggttctattatggcaaaatggtgcttagcacatcacaaagaaaatttcctttac
acacattttgaagatatctgtgccattttaaaacaatacgatgttgccttttctttagga
gacgggttacgtccaggttctgttgcagatgccaatgacgaagcgcaatttgcagaactg
gaaaccttgggagaactaaccaaaatagcgcgtaaacaagaagtacaatgctttattgaa
ggtcctggtcacgtgccaatgcacatgattaaagaaaatatggagaaacaaattgaagtc
tgtgatgaagcgccattctatacattagggccattaacgacagatattgctcctggttac
gaccatattacttctggaattggtgctgccatgattggatggtacgggtgcgctatgctt
tgctatgtaacaccaaaagaacatctagggctaccaaacaaagatgatgtacgtacagga
gttgtgacttataaattagcggcacatgctgccgatttagcaaaaggacatccaggatcg
caacatagggataatgccttaagtaaagcacgattcgaattccgttgggaagatcagttt
aatttaggacttgatccagagttagcgagagcataccacgatgaaaccttacctgctgat
ggtgctaaaatcgcccatttctgttctatgtgcggaccaaagttttgctctatgaaaatt
tcccaggaagtacgaaattttgcagcagaaaatgatatcatagatgatgaagtcgtgcaa
aaaggtatggaagagaaatcaaaagaatttaaagaaaaaggaagcgaagtctatttgtaa
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