KEGG   Flavivirga abyssicola: Q4Q34_16485
Entry
Q4Q34_16485       CDS       T09912                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
fay  Flavivirga abyssicola
Brite
KEGG Orthology (KO) [BR:fay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fay03016]
    Q4Q34_16485
Enzymes [BR:fay01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     Q4Q34_16485
Transfer RNA biogenesis [BR:fay03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Q4Q34_16485
 Prokaryotic type
    Q4Q34_16485
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4 Anti-Pycsar_Apyc1 Svf1_C Lactamase_B_6 PDEase_II
Other DBs
NCBI-ProteinID: WVK12815
LinkDB
Position
3952484..3953389
AA seq 301 aa
MKLTILGCYSATPRTLNNTTSQVLEINNHMFLIDCGEGTQVQLRKHKIKFNRIKHIFISH
LHGDHFFGLVGLISTFRLLTREADLHIYGPKGIKEVVTLQMKLADSWTNYNLIFHELTSN
KSELIFEDEKVLVHTVPLNHRVYTNGFLFQEKEGDRKLKIEAVEAANINVAYYRKLTQGF
DVVNENGETIKNESVTKAGLKPKSYAFCSDTMYKEDIVPIIKNVDVLYHESTFLEKHAHL
GPKTKHSTAKEAATIAKLANAGTLLLGHYSTRYDGLNAFKEEAQEVFDNVELCEDGKTFE
F
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaagctcactattttaggctgttatagcgctaccccaagaacactaaacaataccaca
tcccaagtattagagattaacaaccatatgtttttaatagattgtggagaaggtactcaa
gtacagcttcgtaagcacaaaataaagtttaatcgtattaagcacatatttatatcacat
ttacatggggatcatttttttggtttagttggtttaatatctacctttagattacttacc
agagaagcagatttacatatttatgggccaaaaggaattaaagaagttgttactttacaa
atgaagttagccgattcctggactaattataatcttatctttcatgaactaacttcaaat
aagtcagaattgatctttgaagacgaaaaggttctggtacatacagttcctctaaatcat
cgggtttacaccaatggatttttatttcaagaaaaagaaggggatcgtaagttaaaaatt
gaagcagtagaggccgctaatatcaatgttgcttattatagaaaactaacccagggtttt
gatgttgtaaacgaaaacggggaaactataaaaaatgaatctgttacaaaagctggttta
aaaccaaaaagctatgcgttttgtagtgatactatgtataaagaagatatagtccctatt
ataaaaaatgtagatgtactgtatcatgaatctacctttttagaaaaacatgcccattta
gggcctaaaacaaagcactctactgcaaaagaagcagctacaatagccaaattagctaat
gcaggtacattattgcttggacattattcaacgcgttacgatggcttaaacgcttttaaa
gaagaagcccaagaagtttttgataatgtggagttatgtgaagatggaaaaacttttgag
ttttaa

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