Flavivirga abyssicola: Q4Q34_16570
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Entry
Q4Q34_16570 CDS
T09912
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
fay
Flavivirga abyssicola
Pathway
fay03030
DNA replication
fay03430
Mismatch repair
fay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q4Q34_16570 (dnaX)
03430 Mismatch repair
Q4Q34_16570 (dnaX)
03440 Homologous recombination
Q4Q34_16570 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fay03032
]
Q4Q34_16570 (dnaX)
03400 DNA repair and recombination proteins [BR:
fay03400
]
Q4Q34_16570 (dnaX)
Enzymes [BR:
fay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q4Q34_16570 (dnaX)
DNA replication proteins [BR:
fay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q4Q34_16570 (dnaX)
DNA repair and recombination proteins [BR:
fay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q4Q34_16570 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_14
AAA_30
AAA_5
Rad17
DNA_pol3_gamma3
RCF1-5-like_lid
DNA_pol3_delta_C
TIP49
AAA_18
nSTAND3
AAA_7
AAA_16
AAA_24
NTPase_1
AAA_19
AAA_2
Mg_chelatase
NPHP3_N
AAA_assoc_2
RNA_helicase
AAA_28
Sigma54_activ_2
TrbC_Ftype
IstB_IS21
SRP54
ABC_tran
NACHT
TsaE
Rtt102p
Motif
Other DBs
NCBI-ProteinID:
WVK12832
LinkDB
All DBs
Position
complement(3976106..3977839)
Genome browser
AA seq
577 aa
AA seq
DB search
MEHFVVSARKYRPQTFKDVVGQQAITNTLLNAIDNNHLAQALLFTGPRGVGKTTCARILA
KMINSDGTETNDEDFAFNIFELDAASNNSVDDIRSLTDQVRIPPQVGKYKVYIIDEVHML
SQAAFNAFLKTLEEPPKHCIFILATTEKHKIIPTILSRCQIFDFKRITVKDAKEYLKFIA
EEQGVTADDDALHIIAQKADGAMRDALSIFDRVVSFSGKNLTRQAVTENLNVLDYETYFT
STDLILENKIPELLLQFNNTLSKGFDGHHYISGLASHFRDLLVTKTPETIELLEVGEQTK
TKYLEQSKKASQEFLLQGINLANDCDLKYKTSKNQRLLIELCLMQLASITFDGEKKNSRH
YIIPASYFKKKGVTPVPVTAPKQEQNNSVADNSIEENTKTESTYSNKIKAFQVNEPPTII
LKKETKRASGLSLSSIKAKKEHLIKQMDVVIEEEDLPKESFTEKELVNVWNTYIEIIRGK
GKHNLASILSIDTPKVKETTVYLEFPNATNKVEVERNQYDLLAYIRKSLNNYDISLSISI
NEVMEKKYAYTTAEKFEKLKEKNSNIDILRKTFDLDI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttggaacactttgtagtatcagccagaaaatatagaccacaaacatttaaagatgttgtg
ggacaacaggctattacaaatactttactgaatgcaatagacaataaccatttagctcaa
gccctactctttacagggcctcgtggtgtaggtaaaacaacttgtgcgcgtattctcgct
aaaatgattaacagtgatggtaccgaaactaatgatgaagattttgcatttaatattttt
gaactagatgcagcttcaaacaattctgttgatgacattaggagtttaacagatcaggtt
cgtataccacctcaggttggaaaatacaaagtgtacattattgatgaggtacatatgcta
tctcaagctgcttttaacgcgtttcttaaaacattggaagaaccgcctaaacattgtatt
tttattttagcaactactgaaaaacataaaataattccaactattttatcgcgttgtcag
attttcgattttaaacgcattaccgtaaaagatgctaaagaatatttaaaatttattgca
gaagaacaaggtgtcactgcagatgatgatgcgttacatattatagctcaaaaagcagat
ggtgctatgcgtgacgccctatctatttttgatagagtggtaagtttttcgggtaaaaat
ctaaccaggcaagcagttacggagaatttaaatgtacttgactacgaaacctattttaca
agtacggatttaattttagaaaataagattccggaattgctactacaattcaataataca
ttgtctaaagggtttgatggacatcattatatctctggattagcatctcattttagagat
ttattagtaactaaaacgcctgaaactatcgaattactagaagtaggagaacaaaccaaa
acgaaatacttagaacaatctaaaaaagcttcacaagagttcctccttcaaggcataaat
ctagcaaacgattgcgatctcaaatacaaaaccagcaaaaatcagcgcttacttatcgag
ttatgtttaatgcagcttgcctctatcacttttgatggagaaaaaaaaaatagcagacat
tacataattccagcttcttactttaaaaagaaaggggttactcctgttccagtaacagct
cctaagcaagaacaaaataattcagttgccgacaattcaatagaggaaaatactaagact
gaatcaacttattcaaataaaataaaagcttttcaagttaatgagcctccaacaataatt
ttaaaaaaagaaaccaaacgagcttctggtctttcattaagtagcataaaagctaaaaaa
gaacatcttattaaacaaatggatgttgttatagaagaagaagatttacctaaagaaagt
tttactgagaaagaacttgtaaatgtttggaatacttatatcgaaataataagaggtaaa
gggaaacataatttagcttcaatattgtctatagatactccaaaagttaaagaaacaacg
gtttatttagagtttccaaacgccacaaataaggttgaggtagaacgtaaccaatatgat
cttttggcttatattagaaagtctttaaacaactatgacattagcttatcgattagtata
aacgaagtcatggagaaaaaatatgcttatactaccgcggagaagtttgaaaaattaaaa
gagaaaaattctaatattgatatattaagaaagactttcgatttagatatataa
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