Flavivirga abyssicola: Q4Q34_17295
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Entry
Q4Q34_17295 CDS
T09912
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
fay
Flavivirga abyssicola
Pathway
fay00521
Streptomycin biosynthesis
fay00523
Polyketide sugar unit biosynthesis
fay00525
Acarbose and validamycin biosynthesis
fay00541
Biosynthesis of various nucleotide sugars
fay01055
Biosynthesis of vancomycin group antibiotics
fay01100
Metabolic pathways
fay01110
Biosynthesis of secondary metabolites
fay01250
Biosynthesis of nucleotide sugars
Module
fay_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Q4Q34_17295 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Q4Q34_17295 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Q4Q34_17295 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Q4Q34_17295 (rfbB)
00525 Acarbose and validamycin biosynthesis
Q4Q34_17295 (rfbB)
Enzymes [BR:
fay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Q4Q34_17295 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NmrA
adh_short
Methyltransf_31
KR
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
WVK12971
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All DBs
Position
4129347..4130396
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AA seq
349 aa
AA seq
DB search
MKILITGGAGFIGSHVIRLFLTKYPQYEIYNLDKLTYAGNLENLKDLEHLDNYTFIKGDI
TDENYINQIFDKYKFDAIIHLAAESHVDRSITAPLSFAKTNILGTMILLNAFKNLWKDNW
EGKLFYHVSTDEVYGTLGIDGLFEESTPYDPNSPYSASKASSDHFVRAYGETYNLPYVIS
NCSNNYGPNQFPEKLIPLFINNIIKNKPLPVYGDGNYTRDWLYVKDHAIAIDLVFHKGKN
AETYNIGGFNEWKNLDLVKLLCDVMDEKLDRKPGSSQELISFIKDRPGHDLRYAIDASKI
NNNLGWSPSVTFEQGLLKTIDWYLENSEWLQNVTSGNYQSYYNKMYLHN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattaataacaggaggcgcaggttttataggatcacatgttattagattgttt
ttaactaaatatcctcaatacgaaatctataacttagacaaactaacctatgctgggaat
ttagagaatttaaaagatttagaacacttagataattacaccttcattaaaggtgatatt
actgacgaaaattatataaatcaaatttttgataagtataaatttgatgccattattcat
ttggctgcagaatcacatgttgataggtcaattacagcccctttgtcatttgctaaaaca
aatattttaggcactatgattttgctaaatgcattcaaaaatttgtggaaagataattgg
gagggtaaattgttttatcatgttagtacagatgaagtatatggaactttaggcattgat
ggattatttgaagaatctactccttatgaccctaattctccttattcagcatcaaaagca
agttcagatcactttgtaagagcatacggggaaacatataatttaccttatgttatttcc
aattgttcaaataattatgggccaaaccaattccctgaaaaactcattcctttatttata
aataacattataaagaataagcctttacctgtttatggagacggtaattatactagagat
tggttgtacgtaaaagatcatgcaatagcaatagatttagtctttcacaaaggaaaaaat
gccgaaacttataatattggaggttttaatgaatggaaaaacttagatttagtaaagtta
ctttgtgatgttatggatgaaaaattagatagaaaacctggtagttcgcaagaattaata
tcgtttataaaagatagacctggtcatgatttaagatatgctatcgatgcatcaaaaatt
aacaataatttgggatggagcccttcagtgacctttgagcaaggcttgttgaaaactata
gattggtatttagaaaactcagaatggttacaaaatgttacttctggaaattatcaatcc
tattacaacaaaatgtatttacataattag
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