Flavivirga abyssicola: Q4Q34_19065
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Entry
Q4Q34_19065 CDS
T09912
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fay
Flavivirga abyssicola
Pathway
fay03030
DNA replication
fay03430
Mismatch repair
fay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q4Q34_19065
03430 Mismatch repair
Q4Q34_19065
03440 Homologous recombination
Q4Q34_19065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fay03032
]
Q4Q34_19065
03400 DNA repair and recombination proteins [BR:
fay03400
]
Q4Q34_19065
Enzymes [BR:
fay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q4Q34_19065
DNA replication proteins [BR:
fay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q4Q34_19065
DNA repair and recombination proteins [BR:
fay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q4Q34_19065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DEDDh_C
GIY_YIG_2
DNA_pol_A_exo1
DUF7508
T5orf172
Motif
Other DBs
NCBI-ProteinID:
WVK15385
LinkDB
All DBs
Position
4553415..4554779
Genome browser
AA seq
454 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIYKYDGHEVVDQFISLVNPEREIQPFVVNLTGINSNM
LRHAPKFYEVAKRIVEITDDCILVAHNAQFDYRILKTEFSRLGFDFERKSLCTVELSKNL
IPDQPSYSLGKLVRSLGIPVTDRHRASGDALATVKLFKMLLDKDSTKSIIQESIRLNPKH
QLEPRHIDIIKDLPDITGVYYIHKANGDIIYIGKSNNIKKRINQHFTSTNQKSKKIQAQV
TAVTYEATGSELVALLKESEEIKRVKPIFNRALRRTSFTHALYSFKDENDYINLKIDVAD
GRKKPITTFSNKQSGKSFINKAIEEYKLCQKLTGIYKTKTSCFNYDIKTCEGACIQKEPT
ETYNKRVELLLSKNSFSNKNMVIIDKGRDIDEHSAILIENGVFKGLGFFNLNYQINNIEV
LESIITPMNNNRDTQHIIQNYLRKNKKVKQIIFD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atttacgcaatattagacatagaaactaccggaggtaagtataatgaagaaggcattaca
gaaattgcgatctataaatatgatggtcatgaagtagtcgatcaatttataagtctggta
aacccagaacgtgagatacaaccctttgtagtaaatctaactggtataaacagcaatatg
ctgcgccatgcacctaaattttatgaagttgccaaacgtattgtagaaatcacagacgat
tgtattttggtagcgcacaacgctcaatttgattatcgaattttaaaaacagaatttagc
cgcctaggattcgattttgaaagaaaatcactttgcactgtagagctctcaaaaaattta
attcccgaccaaccttcttatagtctaggtaaattagttaggtctcttggtattcctgta
acagacagacatcgtgcttctggcgatgctttggcaacagtaaagctatttaaaatgctc
ttggataaagacagtactaaaagcattattcaggaatctatacgattaaatccaaaacat
cagttagaaccaagacatatagatattattaaagatttacctgatattactggtgtttac
tacattcataaagctaatggagatattatatatattggaaaaagtaacaatataaaaaaa
cgtatcaatcagcattttacaagtacaaaccaaaaatcaaaaaaaatacaagctcaagtt
accgctgttacttatgaagcgacaggtagtgaactagttgcactcttaaaagaaagtgaa
gaaataaaacgtgttaaacctatatttaacagagcattgcgccgaaccagctttacacat
gccttatatagttttaaggatgaaaacgattatataaatttaaaaatcgatgttgcagac
ggacgtaaaaaaccaatcacgacttttagtaataaacaaagtggtaagagttttatcaat
aaagctattgaggagtacaaattatgtcaaaagctaacaggtatatataaaacaaaaaca
agctgttttaactatgatataaaaacatgcgaaggggcttgcattcaaaaagaacctaca
gaaacttataataaaagagtagagttattattgtctaaaaacagtttctccaacaaaaac
atggttattattgataaagggcgtgatattgatgaacacagtgccatactcattgaaaat
ggtgtatttaaaggattgggcttttttaatcttaactatcaaatcaataatattgaggtt
ttagaatctattatcacccctatgaataataatcgcgacacacagcatattattcaaaac
taccttcgtaaaaataaaaaagtaaaacaaattatatttgattag
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