Flavobacterium azooxidireducens: M0M57_03470
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Entry
M0M57_03470 CDS
T08660
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
faz
Flavobacterium azooxidireducens
Pathway
faz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
faz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M0M57_03470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
faz03019
]
M0M57_03470
03016 Transfer RNA biogenesis [BR:
faz03016
]
M0M57_03470
Enzymes [BR:
faz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M0M57_03470
Messenger RNA biogenesis [BR:
faz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M0M57_03470
Transfer RNA biogenesis [BR:
faz03016
]
Prokaryotic type
tRNA degradation factors
M0M57_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UPQ79899
LinkDB
All DBs
Position
776290..778452
Genome browser
AA seq
720 aa
AA seq
DB search
MIPNVTKEVIDLGDGRTISIETGKLAKQADGSVVVRLGDCMLLATAVSARTANPNVDFLP
LTVDYREKFAAAGRFPGGFFKREARPSDSEVLTMRLVDRVLRPLFPDDYHAETQVMIQLM
SHDENVMPDALAGLAASAALAVSDIPFYNLISEVRVARVDGKFIINPSRTQLEQSDIDMM
IGASLDSVAMVEGEMKEISEKEMVEAIKFAHEAIKVQIHAQLRLQEAFGKKEIRTYEGEP
EDEAVYAKVKAAAYDKCYAIAQAASGKSERTEKFALVKEECKALFTEEEYAENADLAGLV
GKYYYKTNKEAVRNVILEKGIRLDGRKTTEIRPIWCEIDYLPSVHGSSLFTRGETQALAT
VTLGTSREANQIDSPSEQGEEKFYLHYNFPPFSTGEAKPLRGTSRREVGHGNLAQRALKN
MIPAECPYTIRIVSEVLESNGSSSMATVCAGTMALMDAGVQMVKPVSGIAMGLITDGQKF
AVLSDILGDEDHLGDMDFKVTGTADGITACQMDIKIDGLRYDIMEQALDQAREGRLHILS
KLVETIATPREDVKKHAPKIIMRTIPGAFIGALIGPGGKVIQELQKATGTTIVINEVDEQ
GVVEILGTDPDGIAAVLAKIDSLLFKPQMGEAYEVKVIKMLDFGAVVEYTAAPGNEVLLH
VSELAWERTENVTDVVNMGDIFQVKYLGVDPKTRKEKVSRKALLPRPPRSEENKITPKKD
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaacgtaacgaaagaagttatcgatttaggagatggaagaaccatttcgatc
gaaaccggaaaattagcgaaacaagcagacggttctgtagtggttcgcctaggcgattgt
atgcttttagctacagctgtttctgccagaacagcaaatccaaacgtagattttttacct
ttaacagtagattatcgtgaaaaatttgctgctgcaggaagatttccgggtggttttttc
aaaagagaagctcgtcctagcgacagtgaagtattaaccatgcgtcttgttgaccgtgtt
ttacgtccacttttcccggatgattatcatgcagaaacacaagtaatgattcaattaatg
agtcatgacgaaaatgtaatgcctgatgctttggctggtttagcagcttctgcagcttta
gcagtatctgacattcctttttacaatttaatttctgaagtacgtgttgctcgtgttgat
ggaaaatttatcatcaacccaagcagaactcaattagaacaatcagacatcgatatgatg
attggtgcttctttggattcagtagccatggtggaaggtgaaatgaaagaaatttcagaa
aaagaaatggtggaagccattaaatttgctcacgaagctatcaaagttcaaattcatgct
caattgcgtttacaagaagcttttggcaaaaaagaaattagaacttacgaaggtgaacct
gaagatgaagcagtttatgccaaagtaaaagcagctgcgtatgacaaatgttatgcaatt
gctcaagcagcttccggaaaaagcgaaagaactgaaaaatttgctttagtgaaagaagag
tgtaaagctttatttactgaagaagaatatgcagaaaatgcagacttagccggtttagtt
ggaaaatattactacaaaacaaacaaagaagctgttcgtaatgtaattcttgaaaaagga
attcgtttagacggaagaaaaacaactgaaatcagaccaatttggtgtgaaatcgattat
ttgccatctgttcacggttcatctttatttacacgtggtgaaacacaagctttagctact
gtaactttaggaacttcaagagaagcaaatcaaattgactctccatcagaacaaggtgaa
gaaaaattctacttgcactataacttccctcctttctcaaccggtgaagcaaaaccgtta
agaggaacatccagaagagaagttggtcatggaaacttggctcaacgtgctttaaaaaat
atgattcctgccgaatgtccttacacaatcagaattgtttctgaagttttagaatcaaac
ggttcttcttctatggcaacagtttgtgcaggaacaatggctttaatggatgcaggagtt
caaatggtaaaacctgtttcaggtattgcgatgggattgattacagatggtcaaaaattt
gctgttttgtctgatattttaggtgatgaagatcacttaggtgatatggactttaaagta
accggaacagcagacggaatcaccgcttgtcaaatggatatcaaaattgacggattgcgt
tatgacatcatggagcaagcgttagatcaagctcgtgaaggtcgtttacatattttaagc
aaattggttgaaacgattgctactccgagagaagatgttaagaaacacgctccaaaaatc
atcatgcgtaccattccgggtgctttcattggtgcattaataggacctggaggaaaagta
attcaagaattacaaaaagctaccggaacaacgattgttattaacgaagtagatgagcaa
ggtgttgttgaaatcttaggaacagatccggatggaattgcagcagttttagctaaaatt
gattcgttactattcaaaccacaaatgggtgaagcttacgaagtaaaagtaattaaaatg
ttagattttggtgctgttgtagaatatactgccgctccaggaaacgaagttttattacac
gtttctgagttagcttgggaaagaaccgaaaatgtaaccgatgtggtaaacatgggcgat
atattccaagtgaaatacttaggcgtagatccaaaaacaagaaaagagaaagtgtcaaga
aaagctcttttgccaagacctccaagatcagaagaaaataaaattacgcctaaaaaggat
taa
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