Flavobacterium azooxidireducens: M0M57_04790
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Entry
M0M57_04790 CDS
T08660
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
faz
Flavobacterium azooxidireducens
Pathway
faz03030
DNA replication
faz03410
Base excision repair
faz03420
Nucleotide excision repair
faz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M0M57_04790 (polA)
03410 Base excision repair
M0M57_04790 (polA)
03420 Nucleotide excision repair
M0M57_04790 (polA)
03440 Homologous recombination
M0M57_04790 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faz03032
]
M0M57_04790 (polA)
03400 DNA repair and recombination proteins [BR:
faz03400
]
M0M57_04790 (polA)
Enzymes [BR:
faz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M0M57_04790 (polA)
DNA replication proteins [BR:
faz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M0M57_04790 (polA)
DNA repair and recombination proteins [BR:
faz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M0M57_04790 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M0M57_04790 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
CcdB
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UPQ80152
LinkDB
All DBs
Position
1072085..1074949
Genome browser
AA seq
954 aa
AA seq
DB search
MSTQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFMNSLMDVIRREKPDHLAV
AFDKGGSDYRYEMYQEYKAHRDETPEAIKIAVPYIQELLKAMQIPIMEKEGFEADDLIGT
LAKQAEKEGFQVFMVTPDKDFAQLVSENIFMYKPARMGNDIEIWGIPEVLAKFEIERPEQ
VIDYLGMMGDSADNIPGFPGVGEVTAKKLLKEFGSMENLLENTDKLKGALKDKIENNKEL
GILSKKLARILLDCPVTFNAEDFELSKPDVQKTDEIFMELEFRQMKTQFDKLFGTGKEYD
EIDINEAASETLETPKAAKKVPTKKSNEDQFDLFGFSDDDSDEVRTNSFYATLETTSHHY
ELVQGDLHLKLLLQNLMNQTSVCFDTETTGIDALNAELVGLALSWEKGKAFYIPFPENQQ
EAQQLIEKFRPFFESETIEKIGQNIKYDLKILANYGISVKGKLFDTMIAHYLINPDMRHN
MDVLSETYLKYSPKSIETLIGKKGKNQKSMRDVNLEDIKEYAAEDADITFQLKEVFSPIL
DKAETKKLFDEIEIPLIPVLAAMESEGIRLDVEFLKKMSVEMQKDITDFEQKIYETAGEK
FNLASPKQLGDILFDKLKIGGAKQKKTKTGQYATGEEVLSYLVNEHQIVKDILEWRQMVK
LQSTYIDALPNQVDPKTQRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRLIRKAFIA
RDENYTLVSADYSQIELRIIAALSGEENMIKAFQNNEDIHKSTAAKVFNVPLEEVTKEQR
SNAKTVNFGIIYGVSAFGLSNQTNLSRKESAELIDAYYATYPKLKAYMAHQVDFARENGY
VQTVLGRRRYLKDINSANAMVRSGAERNAVNAPIQGSAADIIKIAMINIHQKLTSENWQS
KMLLQVHDELVFDVHNSELEKIQPMIKHEMENAFKLNVPLDVDLGMGRNWLEAH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgcaaaaacgccttttccttcttgatgcttacgctttaatttttcgtgggtat
tatgcttttataaaaaatccgcgaatcaattccaaaggaatggacacttcggccattatg
ggatttatgaattcattgatggatgttatccgacgtgaaaaacccgaccatctcgccgta
gcttttgataaaggcggaagcgattatcgttatgaaatgtatcaagagtacaaagctcat
cgagatgaaacgccggaagccatcaaaattgcagttccttatattcaagaattgttgaaa
gcgatgcaaattccgattatggaaaaagaaggttttgaagccgatgatttaattggaaca
ctagccaaacaagccgaaaaagaaggttttcaagtttttatggtcacacctgataaagat
tttgctcagttggtttcggaaaatatttttatgtacaaacccgcccgaatgggaaatgac
attgaaatttggggaattcccgaagtgctagccaaatttgaaattgaacgtccggaacaa
gtgattgattacttaggaatgatgggcgattctgccgataatattcccggttttcctggt
gtcggtgaagtgaccgccaaaaaattattgaaagaatttggttcgatggaaaatcttttg
gaaaacactgataaattaaaaggtgctttaaaagataaaatcgaaaacaataaagaactt
ggaattttatcgaaaaaactggctcgaattctactcgattgtccggttacttttaatgct
gaagactttgaactttctaaacccgatgttcaaaaaacagatgaaatttttatggaatta
gagtttcgtcaaatgaaaactcaatttgataaactttttggaaccggaaaagaatatgac
gaaattgacatcaatgaagccgcttccgaaacattggaaacaccaaaagcagccaaaaaa
gttccgaccaaaaaatccaacgaagatcaatttgacttgtttggttttagcgatgatgat
tcggatgaagtgagaacaaattcgttttatgctacattagaaacgacttctcatcattat
gaattggttcaaggtgatttacatttaaaactgcttttacaaaatttaatgaatcaaact
tctgtttgttttgataccgaaacaaccggaattgatgcgttgaatgccgaattagttggt
ttggcactttcgtgggaaaaaggaaaagcattctacattccgtttcccgaaaatcagcaa
gaggctcaacaattaattgaaaaattcagacctttttttgaaagtgaaaccattgaaaaa
atcggtcagaacatcaaatatgatttgaaaattttagcgaattatggcatttctgttaaa
ggaaaattgtttgacacgatgattgctcattatttgattaatcccgatatgcgtcataat
atggatgttttatcggaaacatatttgaaatattcgccaaaatccatcgaaacattaatt
ggaaaaaaaggtaaaaatcagaaatcaatgcgtgatgttaatcttgaagacatcaaagaa
tatgctgccgaagatgctgatattacgtttcaactaaaagaagttttcagtccgatttta
gacaaagccgaaactaagaaattgtttgatgaaatcgaaattccgttaattccggtttta
gccgcaatggaatctgaaggcattcgattggatgtggaatttctgaaaaaaatgtcggtg
gaaatgcaaaaagacatcactgattttgaacagaaaatctatgaaacggccggtgaaaag
ttcaatttagcttctccaaaacaattaggcgatattttatttgataaattaaaaatcggc
ggagccaaacaaaagaaaaccaaaaccggtcagtatgcgacgggtgaagaggtgttgagt
tatttagtgaacgagcaccaaattgtgaaagacattttggaatggcgacaaatggtgaaa
ttacaaagcacctatattgatgcattgcccaaccaagtagatccaaaaacgcaacgagtt
cacactgattatatgcaaacggttgcggcaaccggacgattgagttcgaataatccgaat
ttgcaaaacattccgattcgtaccgaaagaggacgattaatccgaaaagcgttcattgcc
agagatgaaaattatacattagtttctgccgattattcgcaaatagaacttcgcattatt
gccgctttatcaggcgaagaaaatatgattaaagcctttcaaaacaacgaagatattcac
aaaagtactgctgcaaaagtgttcaatgttccgctggaagaagtcaccaaagaacaacga
agcaatgccaaaacggtgaacttcggaatcatttatggtgtttctgcattcggactttcc
aaccaaacgaatttatcccgaaaagaaagtgccgagttgattgatgcctattatgccact
tatccaaaattgaaagcatacatggcacaccaagtagattttgccagagaaaatggttat
gtacaaaccgttttaggaagacgacgttatttaaaagatattaattccgcgaatgcgatg
gtgcgaagcggtgctgaacgaaatgctgtcaacgctcccattcaaggttctgctgccgat
atcatcaaaatcgcgatgataaacattcatcaaaaattgacttccgaaaactggcaatcc
aaaatgttattgcaggtacacgatgagttggtgtttgatgtacacaattcggaattggaa
aaaattcaaccgatgattaaacacgaaatggagaatgcttttaaattgaatgttccgttg
gatgtggatttggggatgggaaggaattggttggaggctcattga
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