Flavobacterium azooxidireducens: M0M57_12165
Help
Entry
M0M57_12165 CDS
T08660
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
faz
Flavobacterium azooxidireducens
Pathway
faz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
faz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M0M57_12165 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
faz03019
]
M0M57_12165 (rny)
Messenger RNA biogenesis [BR:
faz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M0M57_12165 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
UPQ78373
LinkDB
All DBs
Position
complement(2810953..2812518)
Genome browser
AA seq
521 aa
AA seq
DB search
MDSTLLLIIAGIVGLAAGFAIAKVIEKSNVSNLIKNAKKEATSILKDAKVEAENIKKDKL
LQAKEKFLELKSEHEKEILSKDKKIAEVEKRVRDKESQVSSELAKAKKSADDFDAKIIDY
NNRIEILDKKQIEVEKLHKSQVEQLEVISGLSAEEAKEQLVESLKAEAKTKAMAHIQDTL
EEAKLTAQQEAKKVIINTIQRVGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRALEAA
TGVEIIVDDTPEAIILSCFDPVRREIARLALHKLVTDGRIHPARIEEVVAKTTKQIDDEI
IEVGKRTVIDLGIHGLHPELIKVVGRMKYRSSYGQNLLQHSREVAKLCGIMAAELGLNVK
LAKRAGLLHDIGKVPDTESELPHAILGMQWAEKYGEKEEVCNAIGAHHDEIEMKYLISPI
IQVCDAISGARPGARRQVLDSYIQRLKDLEAIAFGFNGVKSAYAIQAGRELRVIVESEKV
SDEQAAKLSFEVSQKIQTEMTYPGQVKITVIRETRAVNIAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggacagtacattactacttattatcgccggaatagttggcttagcagcgggttttgca
atagcaaaagtcattgaaaagagcaacgtttccaaccttataaaaaatgcaaaaaaagaa
gccacttccatcctaaaagatgcaaaagtggaagctgaaaacattaaaaaagacaaatta
cttcaagcaaaagaaaaatttttagaattaaaatcggaacacgaaaaagaaattttatcg
aaagacaaaaaaattgctgaagttgaaaaaagagttcgtgacaaagaatcgcaagtttca
agcgaattagccaaagctaaaaaatcagctgatgattttgatgcaaaaattattgattac
aataacagaatcgaaattcttgacaaaaaacaaattgaagtcgaaaaacttcacaaaagt
caagttgagcaattagaagttatttccggtttatctgccgaagaagccaaagaacaatta
gtagaaagtttaaaagctgaagctaaaacgaaagctatggctcatattcaagatacgctt
gaagaagctaaattaactgctcagcaagaagctaaaaaagttattatcaacactattcaa
cgtgttggaacagaagaagcagtagaaaattgtgtttctgttttcaatattgaatcggac
gatgtaaaaggtagaatcattggtcgtgaaggaagaaatatccgtgcgttagaagctgcg
acaggtgttgaaattattgtagatgatactcctgaagcgattattctttcgtgttttgac
ccggttagaagagaaattgctcgattagcgttacacaaattagtaaccgacggtcgtatt
caccctgccagaattgaagaagttgttgctaaaacaaccaaacaaattgatgatgaaatc
attgaagttggaaagcgaactgtaatcgatttaggaattcacggtttacatccagaatta
attaaagtagttggtcgaatgaaataccgttcttcttacggacaaaatttacttcaacac
tcgagagaagtggccaagctttgtggaatcatggccgctgaattaggcttaaatgtaaaa
ttagccaaacgtgccggacttttacacgatattggtaaagtacctgatactgaaagtgaa
ttgccacacgcgattttaggtatgcaatgggctgaaaaatatggtgaaaaagaagaagtt
tgcaacgcgattggtgctcaccacgatgaaattgaaatgaaatatttgatttctccaatt
atccaagtttgtgatgctatttctggtgcaagacctggtgcaagacgtcaagttttggat
tcatacattcaacgtttgaaagatttagaagcaattgcttttggatttaatggtgtgaaa
agtgcgtatgctattcaagccggacgtgaattacgtgtgattgtagaaagcgaaaaagtt
tctgatgaacaagctgctaaactttcgtttgaagtttctcaaaaaattcaaacggaaatg
acctatccgggacaagtgaaaattactgtaattcgtgaaacaagagcggtgaatattgca
aaataa
DBGET
integrated database retrieval system
