Flavobacterium azooxidireducens: M0M57_12680
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Entry
M0M57_12680 CDS
T08660
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
faz
Flavobacterium azooxidireducens
Pathway
faz03420
Nucleotide excision repair
faz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
faz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M0M57_12680
03430 Mismatch repair
M0M57_12680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faz03400
]
M0M57_12680
Enzymes [BR:
faz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M0M57_12680
DNA repair and recombination proteins [BR:
faz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M0M57_12680
MMR (mismatch excision repair)
Other MMR factors
M0M57_12680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UPQ80878
LinkDB
All DBs
Position
2918554..2920875
Genome browser
AA seq
773 aa
AA seq
DB search
MQEYINQLNEAQRAPVLQKDGPMIVIAGAGSGKTRVLTMRIAYLMSLGVDAFNILSLTFT
NKAAREMKKRISDIVGSNEAKNLWMGTFHSVFAKILRIEAEKLGYPSNFTIYDAQDSVRL
IGAIIKEMQLDKDIYKPKQVFSRISSYKNSLITVKAYFNNPELMEQDAMSKKPRIGEIYN
NYVERCFKSGAMDFDDLLLKTNELLNRFPDVLAKYQDRFRYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYADVQLFRLEQNYRSTKNIVEAANS
IIDKNKTKLDKVVWTHNQDGPKIKVNRSITDGEEGRFVASTIFDEKMRNQMKNGEFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLVINPKDEEALVRVINYP
ARGIGDSTIEKLTVAANHYKRSIFEVMENIDKIDLKLNSGTKRKLEDFVMMIKSFQVINE
NQDAFFLADHVSKKTGLVQELKKDGTPEGIARIENIEELLNGIKDFIEGQKEIDGARGAL
SEFLEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPTVFVVGMEEDLFPSAMSLNTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLMDSEPSRFIEEIDDRYLEYISAVETGY
RYKPMIDNDIFGDVDKSRLRLAKPTNGTPPKKYGEEPSSTIRKLKPVSGNAPSGNNLFDS
GLVPGNIVMHERFGKGQVLNLEGVGADKKAEIKFDVGGIKKLLLRFAKLDVIG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atacaagaatatataaatcaactcaacgaagctcaacgtgcacccgtgctacaaaaagac
ggaccaatgattgtgatcgccggtgcaggatcaggaaaaacacgtgtgctcacgatgcga
attgcctatttaatgagccttggagttgatgcgttcaacattttatcgctcacgtttacc
aacaaagcggctcgcgaaatgaagaaacgtatctccgatatcgtgggcagcaacgaagct
aagaacctttggatgggaacgtttcattccgtttttgctaaaattcttcgtattgaagct
gaaaaattaggttatccaagcaatttcaccatttatgatgctcaggatagtgttcgctta
atcggagccatcatcaaagaaatgcaactggacaaagatatttacaaaccaaaacaagtt
tttagccgaatttcatcctataaaaattcattaatcaccgtaaaagcctatttcaataat
ccggaattgatggaacaagatgcgatgagcaaaaaaccacgaataggtgaaatctacaac
aattatgtagaacgctgtttcaaatcgggagcaatggattttgatgatttgttattaaaa
accaacgaattactgaatcgttttccggatgtgttggccaaataccaagatcgttttcgc
tatattttggtggatgagtaccaagataccaaccactcacagtatttaatcgttcgagca
ttgtctgatcgttttcaaaatatttgtgtggtgggtgatgatgctcaaagtatttatgcg
tttcgtggagccaacatcaacaacattctgaatttccagaaagattatgctgatgtgcaa
ttatttcgcttagagcaaaattatcgttcgactaaaaatattgtcgaagcagcgaattcc
atcatcgataaaaataaaaccaaattggacaaagtcgtttggacgcacaatcaagacggt
ccaaaaataaaagtcaatcgcagcattacagatggtgaagaaggtcgattcgtcgcttca
acaatcttcgatgaaaaaatgcgaaaccaaatgaaaaacggtgaattcgctattttatat
cgaaccaatgctcaatcccgtgcgatggaagatgcgttgcgaaaacgtgacattccatac
cgaatttacggcggattatccttttaccaacgtaaagaaatcaaagatgttttgtgttat
ttacgattggttattaatccaaaagatgaagaagcattggtgcgagtaatcaattatcct
gctcgtggaattggtgacagtacgatagaaaaattaactgttgcagccaatcattacaag
cgttccatttttgaagtaatggaaaatattgataaaattgacctcaaactcaattccgga
accaaacgaaaactggaagattttgtgatgatgattaaaagttttcaagtcatcaacgaa
aaccaagatgctttttttcttgccgatcacgtttctaaaaaaaccggtttggtgcaagaa
ctcaaaaaagacggaactccggaaggaattgcgagaattgaaaacatcgaagaattactc
aacggtatcaaagacttcatcgaaggacaaaaagaaattgatggagcacgaggagcatta
tcagaatttttagaagatgtagccttagcaaccgatttagacaaagataccggcgacgat
gatcgagtagctttaatgaccattcacttagccaaaggattagaatttccaaccgttttt
gtcgttggaatggaagaggatttgtttccaagtgcaatgagtttaaatacacgtagcgaa
ttggaagaagaacgacgtttgttttatgtcgcattaacccgagctgaacatcaagcctat
ttaacctatgctcaatctcgttatcgttggggaaaattaatggacagcgaaccttctcgt
tttatcgaagaaattgacgatcgctatttagaatatatcagtgcagtagaaaccggttat
cgctacaaaccaatgattgacaatgatatttttggcgatgtggacaaatcaagattgcga
ttggcgaaaccaactaatggaacgccacccaaaaaatatggcgaagaaccttcgtcaaca
attagaaaattaaaacccgtttccggtaacgcaccatcagggaataatttatttgattct
ggtttagttcccggtaacatcgtaatgcacgaacgattcggtaaagggcaagttttaaac
ctcgaaggagtaggagccgataaaaaagccgagattaaatttgatgtgggtgggataaaa
aagttgttgctgcggtttgctaagctagatgttatcggttaa
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