Flavobacterium azooxidireducens: M0M57_15940
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Entry
M0M57_15940 CDS
T08660
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
faz
Flavobacterium azooxidireducens
Pathway
faz03030
DNA replication
faz03430
Mismatch repair
faz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M0M57_15940 (holA)
03430 Mismatch repair
M0M57_15940 (holA)
03440 Homologous recombination
M0M57_15940 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faz03032
]
M0M57_15940 (holA)
03400 DNA repair and recombination proteins [BR:
faz03400
]
M0M57_15940 (holA)
Enzymes [BR:
faz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M0M57_15940 (holA)
DNA replication proteins [BR:
faz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M0M57_15940 (holA)
DNA repair and recombination proteins [BR:
faz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M0M57_15940 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UPQ79098
LinkDB
All DBs
Position
complement(3672463..3673467)
Genome browser
AA seq
334 aa
AA seq
DB search
MDEIVKIINDIKNGNIKPIYFLMGEEPYYIDKLTEYIEDNVLSEDEKGFNQMVLYGRDVS
VEDIISNAKRYPMMADRQVVIVKEAQELSRTIDKLESYAENPQPSTVLVIAYKYKTLDKR
KKLTKIIDKNGLLFESKKLYENQVAAWISRVLKPKDYSIEPKASAMLVEFLGTDLSRISN
ELDKLQIILPKGTVINPNHIEENIGFSKDFNVFEFRKAIGDRDQLQAYRIADHFAQNKKE
YPMVLTTGMVFSFFSQVLQYHGLKDKNPKNVASVLKINPYFVKDYDVALKNYPMKKVSSI
VATLRDIDLKSKGVGANQLHESDLLKEMLVKIFN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatagtaaaaatcatcaacgatattaaaaacggaaatatcaaacctatatat
tttttaatgggtgaagaaccttattatattgataaattaactgaatatatcgaagataat
gtgctctcggaagacgaaaagggattcaatcaaatggttttgtacggaagagatgtttcg
gttgaagatatcatttcaaatgccaaacgttatcctatgatggccgatagacaggttgtg
attgtaaaagaagcacaagaactttcgagaacaatagataaattagaaagttatgccgaa
aatccgcaaccatcaacggttttggtaattgcttacaagtataaaacgttagacaagcga
aaaaaattaaccaaaattattgataaaaacgggttgttatttgaaagcaaaaaattatat
gaaaaccaagtagcggcatggatttcaagggttttgaagcctaaagattattccatagaa
ccgaaagcttctgccatgttggtagaatttttaggaaccgatttgagcagaattagcaat
gaattagacaaattgcaaattattttaccaaaagggaccgtcatcaatcccaaccatatt
gaagaaaacattggatttagtaaagatttcaatgtgtttgaatttcgcaaagcaataggc
gatcgagatcaattgcaagcctaccgaattgctgatcattttgctcaaaacaaaaaagaa
tacccaatggttttgactacgggaatggttttttcgttcttttcgcaagtactgcaatac
cacggtttaaaagacaaaaatcctaaaaatgtggcaagtgttttaaagataaatccttat
tttgtaaaggattacgatgtggcattaaaaaattatcccatgaaaaaagttagttcaatt
gtagccactttacgtgacattgacttaaaaagcaaaggagttggtgcgaatcaattacac
gaatcagatttattgaaagaaatgttagttaaaatctttaactag
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