Flavobacteriaceae bacterium 3519-10: FIC_00086
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Entry
FIC_00086 CDS
T00953
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fba
Flavobacteriaceae bacterium 3519-10
Pathway
fba03030
DNA replication
fba03430
Mismatch repair
fba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIC_00086
03430 Mismatch repair
FIC_00086
03440 Homologous recombination
FIC_00086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fba03032
]
FIC_00086
03400 DNA repair and recombination proteins [BR:
fba03400
]
FIC_00086
Enzymes [BR:
fba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIC_00086
DNA replication proteins [BR:
fba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIC_00086
DNA repair and recombination proteins [BR:
fba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIC_00086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
DNApol_Exo
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
ACU06562
LinkDB
All DBs
Position
complement(79248..80471)
Genome browser
AA seq
407 aa
AA seq
DB search
MYSVIDIESNGAGFRKESIIEIAVYKYDGHEIVDQFISLVNPESEITPFVQKLTKISPKM
VKTAPKFPEIARRVIEITRNTILVGHNIDFDYRMLRQEFKRLGYDFTINTLDTIPLAKKL
IPEAESYSLGKLVKSLGIPLVDQHRASGDARATLDLFKLLLIKDKNSEIIQQHHEESNGK
TYLNKVRNLTQDLPAARGIIYMQNAEGKIIYFDFVDDLSKFAKHVFSSKLKRWAQIQTDV
EQIQYELTGSDLLAKLMMSTKGLRKRESLQYGLYYRNSKYFVEKITNIKTELPLLKFRSF
TQGLKAVSFLQARPELDDVAALKKLISLSGRNELWLSAGRVLGEKSFLILENGRLTGFGF
YELHTQINSPKKLAAMKIDFTRFSDDIKNDLKLSLLRGDFEIQALPQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagtaatcgatatagaaagtaacggcgcaggattcaggaaagaaagcattatt
gaaattgctgtgtacaaatatgatgggcacgagatcgtagaccagttcatatcactcgtt
aatcctgaaagcgagatcacgccgttcgtgcagaaactcacaaaaatttcgccgaaaatg
gtgaaaactgcgccaaaattccccgaaattgcccgcagagtgattgaaattacgcgcaac
acaattcttgtgggtcataatatcgatttcgattaccgcatgctccgccaggaattcaaa
agactaggttatgatttcacaatcaatacgttagacaccattccacttgccaaaaaactc
attcctgaggccgaaagttattcactcggcaaactggtaaaatcacttggtattccattg
gtagaccagcaccgcgcttcgggcgacgcacgcgcaactttagatttattcaaactgcta
ttaatcaaagacaaaaactccgaaattattcagcagcaccacgaggaaagcaatggcaaa
acgtacctgaataaagtgcgcaacctcacacaggatcttccggcggcgcgcggcattatt
tatatgcagaatgctgagggaaaaataatctatttcgattttgtggacgatctcagcaag
tttgcgaaacacgtattcagttcaaagttgaaaagatgggcacagattcagactgacgta
gaacagattcagtacgaattaaccggaagcgacttgctggcgaaactgatgatgtcgaca
aaaggtctacgaaaacgcgagagcctgcaatatggcctatactatcgcaacagtaaatat
ttcgtcgaaaaaattacgaatataaagacagagcttcccttgctgaaattcagatcgttc
acccagggcctaaaagccgtaagctttctgcaggcaagacccgaattagacgatgtggca
gcacttaaaaaacttatttcactgagtggccgcaatgaactttggctttctgcgggaaga
gtattaggtgaaaaatcttttttaatactcgaaaacgggcgcctcaccgggtttggtttc
tatgagctgcacacgcagattaattcgccaaagaaactcgctgccatgaagattgacttt
acgaggttttctgatgacattaaaaacgatctcaaactttcacttttgcgcggcgatttt
gagattcaggctttgcctcagtag
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