Flavobacteriaceae bacterium 3519-10: FIC_00260
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Entry
FIC_00260 CDS
T00953
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fba
Flavobacteriaceae bacterium 3519-10
Pathway
fba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIC_00260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fba03019
]
FIC_00260
03110 Chaperones and folding catalysts [BR:
fba03110
]
FIC_00260
03029 Mitochondrial biogenesis [BR:
fba03029
]
FIC_00260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fba04147
]
FIC_00260
Enzymes [BR:
fba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FIC_00260
Messenger RNA biogenesis [BR:
fba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FIC_00260
Chaperones and folding catalysts [BR:
fba03110
]
Heat shock proteins
HSP60 / Chaperonin
FIC_00260
Mitochondrial biogenesis [BR:
fba03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FIC_00260
Exosome [BR:
fba04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FIC_00260
Exosomal proteins of other body fluids (saliva and urine)
FIC_00260
Exosomal proteins of breast cancer cells
FIC_00260
Exosomal proteins of colorectal cancer cells
FIC_00260
Exosomal proteins of bladder cancer cells
FIC_00260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
REF
Pho88
Motif
Other DBs
NCBI-ProteinID:
ACU06733
UniProt:
C6X048
LinkDB
All DBs
Position
260279..261904
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEIKFDVESRDALKRGVDALANAVKVTLGPKGRNVVIEKSFGAPHVTKDGVTVAKEIE
LEDRVENMGAQMVKEVASKTNDIAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID
KAVTAVVQNLKSISQEVGDSSEKIRQIASISANNDDTIGALIAEAFGKVGKEGVITVEEA
KGTDTTVDVVEGMQFDRGFQSPYFVTNPEKMITELENPYILLVEKKISSMKELLPVLEPV
AQAGKSLLIISEEVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEERGFTMENATLEMLGTAEKIVIDKDNTTIVNGAGDEAQIKGRVNQIKAQMESTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALV
RSIAVLQNLEGANFDESTGIKIVKRAIEEPLRQIVANAGGEGSVIVAKVADGDADFGFNA
KTDEYVNMYEAGIIDPTKVVRVALENAASVSGMLLTTECVITEVKKDEPAMPMGGGMPGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaataaaattcgacgtagaatcgagagatgccctgaagagaggcgttgac
gcattagcaaatgcagtgaaagttactttaggtccaaaaggccgcaacgtggtaatcgaa
aaatcattcggtgcgccgcacgtaaccaaagacggggtaaccgtagcaaaagaaatcgag
cttgaggaccgtgtagaaaacatgggtgctcagatggtaaaggaagttgcttctaaaacc
aacgacatcgcaggtgacggtactactaccgcaaccgttttggctcaggcaatcgttcgc
gaaggtcttaagaacgtagcagccggtgcaaacccaatggatctgaaaagaggaatcgac
aaagctgtaacagcagtggttcaaaacctgaaatcaatctctcaggaagtaggcgattct
tcagaaaaaatcagacagattgcttcaatttctgcaaacaacgacgataccatcggtgca
ctgatcgctgaagcgttcggaaaagttggtaaagaaggcgtaattactgtagaagaggca
aaaggaaccgatactacggttgacgtggtagaaggtatgcagttcgacagaggcttccag
tctccatatttcgtgaccaatcctgaaaagatgatcactgagcttgaaaatccatatatc
ctcttggtagagaaaaaaatctcttcaatgaaagaattgcttccggttcttgagccagtt
gctcaggcaggaaaatctttgttaattatttctgaagaggttgatggcgaagcgctggca
actttggtagtgaacaaattaagaggttctttaaaaatcgctgccgtaaaagctccgggc
tttggcgacagaagaaaagcaatgctcgaagacatcgcgattcttacaggcggacaggtt
atttctgaagaaagaggcttcacaatggagaacgcaactttagaaatgttgggaactgca
gagaaaatcgtgatcgataaagacaatactaccatcgtaaacggtgcaggcgacgaggct
cagatcaaaggccgcgtaaaccagatcaaagcgcagatggaatctacaacatccgattac
gacagagaaaaacttcaggaaagactggctaaattagccggcggtgtagccgtactttac
gttggtgctgcttccgaagtagaaatgaaagagaaaaaagaccgtgttgatgatgcattg
cacgcaacaagagcggctgtagaagaaggaattgttcccggaggtggcgttgctttggta
agatcaatcgctgtattgcaaaaccttgaaggtgcaaacttcgacgaatctaccggtatc
aaaatcgtaaaaagagcaattgaggagcctttgagacaaatcgtagccaacgcaggtggc
gaaggatccgtaatcgtagcgaaagttgcagacggcgacgccgatttcggtttcaacgcg
aaaactgacgaatatgtaaacatgtacgaagcgggaatcatcgatcctacgaaagtagtg
cgtgtagcgctggaaaacgcagcttcagtatccggaatgcttttaactaccgagtgtgta
atcaccgaggttaaaaaagacgagcccgcaatgccaatgggcggcgggatgccgggaatg
atgtaa
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