Flavobacteriaceae bacterium 3519-10: FIC_00451
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Entry
FIC_00451 CDS
T00953
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fba
Flavobacteriaceae bacterium 3519-10
Pathway
fba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIC_00451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fba03019
]
FIC_00451
03016 Transfer RNA biogenesis [BR:
fba03016
]
FIC_00451
Enzymes [BR:
fba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FIC_00451
Messenger RNA biogenesis [BR:
fba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FIC_00451
Transfer RNA biogenesis [BR:
fba03016
]
Prokaryotic type
tRNA degradation factors
FIC_00451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
Motif
Other DBs
NCBI-ProteinID:
ACU06913
UniProt:
C6X0M7
LinkDB
All DBs
Position
462156..464498
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AA seq
780 aa
AA seq
DB search
MNVPQAIIETIQLKDGREITIETGKLAKQANGSVVVRMGGTMLLATVVANKDASPGVDFL
PLTVDYREKFYSGGKIPGNFFRREARPSDEEILTMRLVDRVLRPLFPDDFHAEVQVMISL
ISYDKECMPEALAGLAASAAIAITDIPFNGPMSEVTVARIDGQLVVNPSRENLDKADLNI
LVGATKDSIVMVEGVMDEITEEEMIEAIKFAHEEIKVQVEAQERLAERVGKSLPKREYTH
ENHDEEIREKVWKDTFDKVYEVAKTPSAKEERHDNFKAVLEEFLAQYSEEELETVKPFAK
IYFHDVEKEAMRQMILNEKIRLDGRTPETIRPIWSEVDYLPGAHGSAVFTRGETQSLTAV
TLGSVKDANMVDSVAINYDEKFFLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALSRI
IPAENPYTIRIVSDILESNGSSSMATVCAGTLALMDAGVQITKPVSGIAMGLVTDPESGK
FTVLSDILGDEDHLGDMDFKVTGTADGITACQMDIKIQGLSMDIMETALKQAREGRLHIL
GEMLKTLDAPRVDVKPHAPKMEVLEIPKEFIGGVIGPGGKIIQQMQKDFQTVIAIEEIGE
IGRIEISGVSRENINATIAAINEITFVPTVGEVYNGRVVKVMDFGAFVAIAKGTEGLLHI
SEIEWARLDKVPYNEGDMVEVKFMGYDDRKKMKLSRKVLLERPPRTERKEGEGENRENRD
SRPPRNDRRDGGDRRRDDNFNRGNNRPEHSGRQTEKPAGEDTFKPLNESENTDDVKPEGF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttccacaagcaattattgaaacaattcaattaaaggatggcagagaaatcacc
atcgaaacagggaagctggcaaaacaggccaacggatctgtagtagtaagaatgggcggc
acgatgcttctagcaaccgttgtagccaacaaagatgcaagcccgggcgtggatttcctt
ccactgacggtagattacagagagaaattctattcaggaggtaaaatccccggaaacttt
ttccgtagagaagccagaccttcggatgaggaaatccttacaatgagattggtagaccgc
gttttgcgtccgcttttcccggacgatttccacgctgaagttcaggtgatgatttccctg
atttcctatgataaagaatgtatgcctgaagcactggctggtttagccgcttctgcagct
atcgcaattaccgacatccctttcaacggaccaatgtctgaggttactgtagcgagaatc
gacgggcaacttgttgtaaatccaagcagggagaatctggataaagcagaccttaacatc
cttgtaggtgctaccaaagactctatcgtaatggtagaaggtgtgatggacgagattacc
gaagaggaaatgatcgaagccattaaattcgcacacgaagaaattaaagttcaggttgaa
gctcaggaaagacttgctgaaagagtaggcaaatctttaccgaaaagagaatacacccac
gaaaaccacgacgaagaaattcgtgaaaaggtttggaaagatactttcgacaaagtttac
gaagtagccaagacaccttctgcaaaagaagaaagacacgataacttcaaggctgttctg
gaggagttcttagctcagtattcagaagaagaactggaaacagttaagccgttcgccaag
atctatttccacgatgtggagaaagaggcaatgagacaaatgatcctgaacgagaaaatc
cgtctggatggccgtacgccggaaactatccgtccgatctggtcagaagtggattacctg
ccgggagctcacggatctgcagtattcaccagaggtgaaactcagtctttaacagctgta
actttaggttcagtgaaagatgccaatatggtagattcagtggccatcaattacgacgag
aaatttttccttcactataacttcccaccattctcaacaggtgaggcaagacctttaaga
ggtacatcaagaagggaagtaggacacggaaaccttgcacagcgtgcgctttccagaatt
attccggcagaaaacccatatacgatccgtattgtttctgatatccttgaatctaacggt
tcatcttcaatggcaacggtttgcgccggtacattggctttgatggacgcgggtgtacag
atcacgaaaccggtttcaggtattgcaatgggattggtaactgatcctgaatcaggtaaa
ttcactgtactttccgatatcttaggagacgaagatcacttaggtgatatggactttaaa
gtaaccggaacggcagacggaatcacggcttgccagatggatatcaagatccagggactt
tctatggacatcatggaaacggcactgaaacaagcgagagaaggccgtcttcatatcctt
ggtgaaatgctgaagaccttggatgcaccacgagttgatgttaaaccacacgctccgaaa
atggaagtactcgagattcctaaagaattcatcggtggcgttatcggacctggcggaaaa
atcattcagcagatgcagaaagatttccagaccgttatcgcgatcgaagaaatcggtgag
atcggtagaattgaaatctccggcgtaagcagagagaatatcaacgcgaccatcgcagcc
attaacgaaattactttcgtgccgactgtaggcgaagtttacaacggtagagtagtgaaa
gtaatggatttcggtgcgttcgtagcaattgcgaaaggcactgaaggtttgcttcacatc
tccgaaatcgagtgggcaagacttgacaaagttccttacaacgaaggtgatatggtggaa
gtgaaattcatgggttatgatgaccgtaagaaaatgaagctttcaagaaaagtacttctc
gaaagacctccaagaaccgagcgtaaggaaggtgaaggcgaaaaccgcgaaaaccgcgac
agccgtccgccaagaaacgaccgcagagatggtggcgacagaagaagagacgacaacttc
aaccgtggcaataacagacctgaacacagtggtcgccagactgaaaaaccagcaggagaa
gacaccttcaagccgctgaacgaaagtgaaaatacagacgatgtgaagccggaaggtttt
taa
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