Flavobacteriaceae bacterium 3519-10: FIC_00463
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Entry
FIC_00463 CDS
T00953
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
fba
Flavobacteriaceae bacterium 3519-10
Brite
KEGG Orthology (KO) [BR:
fba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fba03032
]
FIC_00463
03036 Chromosome and associated proteins [BR:
fba03036
]
FIC_00463
03400 DNA repair and recombination proteins [BR:
fba03400
]
FIC_00463
DNA replication proteins [BR:
fba03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FIC_00463
Chromosome and associated proteins [BR:
fba03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FIC_00463
DNA repair and recombination proteins [BR:
fba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FIC_00463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF937
COMMD9_HN
DUF4777
Tex55
Motif
Other DBs
NCBI-ProteinID:
ACU06925
LinkDB
All DBs
Position
475241..475531
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AA seq
96 aa
AA seq
DB search
MTKAELVSTISNKLGTEKNETQKVVEAFMQEIRTSMYNGDNVYLRGFGSFVIKTRAAKTG
RNISKNTAIEIPAHNIPAFKPSKTFVEKVKTKVAVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagaattggtgagtactatctcgaataaattgggcactgaaaagaatgaa
actcagaaggttgtggaagcgttcatgcaggaaatcagaacttcaatgtataatggcgac
aatgtttatttaagagggtttggctcattcgttatcaagaccagagcagcaaaaacggga
agaaatatttctaaaaatacagcaatcgaaatcccggctcacaatattccggcttttaag
ccttctaaaacttttgtagagaaagtgaaaaccaaagtagcggttaaataa
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