KEGG   Flavobacteriaceae bacterium 3519-10: FIC_00518
Entry
FIC_00518         CDS       T00953                                 
Name
(GenBank) Hydrolase (HAD superfamily)
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
fba  Flavobacteriaceae bacterium 3519-10
Pathway
fba03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fba00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FIC_00518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fba03019]
    FIC_00518
Messenger RNA biogenesis [BR:fba03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FIC_00518
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH DUF4954
Other DBs
NCBI-ProteinID: ACU06976
UniProt: C6WZD3
LinkDB
Position
528188..529762
AA seq 524 aa
MTTTVAIIIGIVCLIAGAAIGMLFSKSSLNTKAKFILDDARKNAENLLDKANVQAESIRK
EKQLQAKEKFLELKSQHDADIQSREKKMQETEKRIKDKESKLNDELSKAGKLEKELERKI
GDYNKKHEIIEKKQQELEVATAQKVEMLEKIANYSAEDARNELVEAMKSEAKTRAQAHVQ
SIMEEASLNAKQEAKKIVIQTIQRIGTEQAIENSVSVFNIESDEVKGRIIGREGRNIRAL
EAATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTKKQIE
EEIIEVGKRTVIDLGVHGLHPELVKIVGRMKFRSSYGQNLLQHSREVANIAATMAAELGL
NVKLAKRAGLLHDIGKVPEQESELPHALLGMQWAERYGENPEVINAIGAHHDEVEMTSLL
SPIIQVADAISGARPGARRQVLESYIQRLKDLEAAALSFDGVSSAYAIQAGRELRVMVES
SRVNDDQSSQLSYDISEKIQNELTYPGQVRVTVIRETRSVNIAR
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgacaacaaccgtcgcaattattatcggtattgtatgcctcatcgcgggtgcagcaata
ggaatgctgttttcaaagagttcgctcaacacgaaagcgaagttcatcctggatgacgca
aggaaaaacgccgaaaacctacttgataaagccaatgtacaagccgaatccataagaaaa
gaaaagcagctgcaggctaaagagaagttcctcgagctgaaatcccagcacgatgccgac
atacagtcccgcgagaagaaaatgcaggaaactgaaaaacgcattaaagacaaagaaagt
aaactcaacgacgagcttagcaaagccggtaaactcgagaaagaactcgaacgtaaaatt
ggtgattataacaaaaagcacgaaatcatcgagaaaaagcagcaggaacttgaggtggct
actgcacagaaagtagaaatgcttgaaaaaatagcaaattattctgcagaagatgcccgc
aatgaattggtagaagccatgaaatcagaagccaaaacacgcgcccaggcgcacgtgcag
agcatcatggaggaggcgagccttaacgcaaaacaggaagccaagaaaattgttatccag
acgatccagagaatcggaactgagcaggcgatcgaaaactcggtttcagtatttaatatt
gaatctgatgaggttaaaggccgtatcattggtagagaaggtagaaatatacgtgccctc
gaagctgcaactggcgttgaaattattgtagatgatacaccggaagcgattctgctttca
tgttttgatcctgtaagaagagaaatcgccagactttcacttcacagattggtaactgac
ggaagaattcaccctgcaagaattgaagaagtggtggagaaaacaaaaaaacaaatcgaa
gaagaaataatcgaagttggtaaaagaactgttatcgatcttggcgtgcacggacttcac
ccggaacttgtaaaaatcgtaggtcgcatgaaattccgctcatcttacgggcagaacctt
cttcagcactcgcgcgaagtagcaaatattgctgcaacaatggctgcagaattaggactc
aatgtaaaactggcgaaaagagcaggcttactccatgatataggtaaagttcctgagcag
gaatctgagcttccacacgcgcttctggggatgcagtgggctgaaagatacggcgagaat
cctgaggttatcaacgcaattggtgctcaccatgatgaggttgaaatgacgtcacttctt
tcaccaatcattcaggtggcggatgcaatttctggcgcaagaccgggcgcaagacgtcag
gtgcttgaatcttatatccaaagattaaaagatctggaagctgcagccttaagctttgat
ggagtttcaagcgcatatgcaatccaggctggccgcgaactccgcgtaatggtagaaagc
agccgcgtaaacgacgaccagtcttcgcagttgtcttacgatatttccgaaaaaatccag
aacgaacttacgtatccgggccaggttcgggtaacagttatacgtgaaacccgatctgtg
aacatcgcacgataa

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