Flavobacteriaceae bacterium 3519-10: FIC_00938
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Entry
FIC_00938 CDS
T00953
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fba
Flavobacteriaceae bacterium 3519-10
Brite
KEGG Orthology (KO) [BR:
fba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fba03016
]
FIC_00938
Enzymes [BR:
fba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FIC_00938
Transfer RNA biogenesis [BR:
fba03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIC_00938
Prokaryotic type
FIC_00938
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ACU07389
UniProt:
C6X4Q1
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All DBs
Position
973293..973994
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AA seq
233 aa
AA seq
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MTDQDFLEGQIILLDKPLDWTSFQAVNKLKYKLKREFNLPKKFKIGHAGTLDPRATGLLI
VCTGKFTKIIPGIQDAPKEYQTEIKIGVQTESYDTEKPEILPQDFSHITSAQINEVLESF
VGEIDQTPPVFSAIKIDGSRAYDLARKGKDVEMKSRKTTVHYISEVEVELPIIRFTVGCS
KGTYIRSLAHDIGQDLGVGAYLTNLRRTKIGEYSIDSASGDYLNDDFRFSAED
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcaggatttcttagaaggacaaataattttgctcgacaaacctttggactgg
acgagttttcaggctgttaataaactcaaatataaactcaagcgcgaatttaaccttcca
aaaaagttcaagattggccacgccggcacgctggatccacgcgctacaggtttgttgatt
gtctgtaccggaaaattcacgaagatcattccgggtatccaggacgctccaaaagagtat
caaaccgaaataaaaatcggtgtgcagaccgaatcttacgacaccgaaaaacccgaaata
ctgcctcaggatttttctcacataacttcagcgcagattaatgaagttttagagagtttc
gtaggcgaaattgatcagacgccgcccgttttttcagccattaagattgatgggagccgt
gcctacgacctggcgcggaaaggaaaggacgttgaaatgaaatcgaggaaaacaaccgta
cattacatcagcgaagtggaagtagagctcccgatcatacgttttacagtaggttgttca
aaaggaacgtacattcgcagtttagcgcacgatatcggccaggatttgggcgtaggtgcg
tatctcaccaatctcagacgcacaaagatcggggagtattcaatagacagcgcgagtgga
gactatctgaacgacgatttccggttttctgcagaagattga
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