Flavobacteriaceae bacterium 3519-10: FIC_01068
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Entry
FIC_01068 CDS
T00953
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
fba
Flavobacteriaceae bacterium 3519-10
Brite
KEGG Orthology (KO) [BR:
fba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fba03016
]
FIC_01068
Transfer RNA biogenesis [BR:
fba03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
FIC_01068
Prokaryotic type
Methyltransferases
FIC_01068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
GTP_EFTU
RsgA_GTPase
Arf
Dynamin_N
Ras
ABC_tran
MMR_HSR1_Xtn
AIG1
SRPRB
Gtr1_RagA
AAA_18
ABC_ATPase
AAA_29
DO-GTPase2
AAA_24
AAA_28
Roc
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
ACU07518
UniProt:
C6X530
LinkDB
All DBs
Position
1126087..1127475
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AA seq
462 aa
AA seq
DB search
MNNDTICALATANGIGAIGIIRVSGSDSIRIVNLIFEGKDLEKANSHTVHYGFIKDGDET
VDEVMVTVFMAPKTFTTEDSVEISFHGSPFIGKKILEVLIKNGARMARAGEFTMRAFMNG
RIDLSQAESIADLIASENEASRKVALNQLKGGITNEISILRTDLLNFVSLIELELDFAEE
DVEFADRDALVQLLRKIEEKLISLIDSFEYGNAIKNGVGVAIIGKPNAGKSTLLNALLKE
ERAIVSDIAGTTRDTIEEMLHIKGNAFRLIDTAGLRETSDEIEKIGVAKAREKVATAEIL
VYLIDSTETDISEDVELIRDLARYDLSLIVLLTKTDLPKSALQSEEIRNSLPVLDFKDFH
LIPVSAKQNSNLDELKEAFTGYVDDLNSGENNVVITNQRHFEALQHSLQAVHAVHEAVSS
RITTELLAYELRNALEYLGEISGEFTNDEVLGNIFSKFCIGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgatacaatctgtgcattagcaacggccaacggcatcggcgccatcggaatt
atccgggtttcgggaagcgattcgatccggattgttaaccttatttttgagggcaaagac
cttgaaaaagctaactcgcacactgtgcactatggttttatcaaagacggcgacgagacg
gttgacgaagtgatggtgactgtatttatggcgccaaaaacctttaccaccgaggattct
gtagaaatctcgttccacggatcgccttttatcggcaagaaaattcttgaagttttaatt
aaaaacggcgcacgaatggcccgagccggcgagtttacgatgcgcgcttttatgaacggc
cgcatcgatctttcgcaggcagaatctattgctgacctgatcgcttcagaaaatgaggcg
tcgcgaaaagtggcgctgaaccagttgaaaggcggaattaccaacgaaatttctatcctt
cgcaccgatttgctgaactttgtttccttaatagaacttgaactcgattttgctgaagag
gatgtagagtttgccgaccgcgacgcgttggtgcagcttttacgtaaaatagaagaaaaa
ctcatttcacttattgacagtttcgaatacggaaacgccattaaaaacggagtaggggtg
gcgatcattggaaagccgaatgctgggaaatctacgctgctcaacgcgctgttaaaagaa
gagcgcgcgattgtgagtgatattgccggcacaacccgcgacactattgaggaaatgctt
catatcaaaggcaatgctttccgactgattgataccgcgggtttgcgcgaaacatccgat
gagatcgagaaaattggcgtagcaaaagcgcgcgaaaaagtggccactgccgaaatttta
gtctatctgatcgacagcaccgaaaccgatatatcggaggatgtggaactgatccgcgat
ctggcgcgctacgatttatctttaattgtgctgctgacaaagactgacctacctaaaagc
gccttacaaagtgaagagatccgtaacagcttacctgtcctggatttcaaggactttcat
ctcattccggtgtccgcaaagcagaactcaaaccttgatgaacttaaagaagcatttaca
ggctatgtggatgacctaaatagcggcgaaaacaacgtggtgatcaccaaccagcgccat
ttcgaggcgctgcagcactcactgcaggccgttcatgctgtgcacgaagcagtaagttcc
aggattaccaccgagctgctggcgtacgagctccgcaacgctttggaatacctcggcgaa
atatcgggggaatttaccaatgacgaagtcttaggtaatattttttcgaagttttgtatc
ggaaagtag
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