Flavobacteriaceae bacterium 3519-10: FIC_01163
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Entry
FIC_01163 CDS
T00953
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fba
Flavobacteriaceae bacterium 3519-10
Brite
KEGG Orthology (KO) [BR:
fba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fba03032
]
FIC_01163
03400 DNA repair and recombination proteins [BR:
fba03400
]
FIC_01163
Enzymes [BR:
fba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FIC_01163
DNA replication proteins [BR:
fba03032
]
Prokaryotic type
DNA Topoisomerases
FIC_01163
DNA repair and recombination proteins [BR:
fba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIC_01163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACU07613
UniProt:
C6X5C5
LinkDB
All DBs
Position
complement(1248514..1249620)
Genome browser
AA seq
368 aa
AA seq
DB search
MNTPETDLVASLTPAKIVKIMKDPVKSAKAVRLIYTNDRETSGIIRKKSRDKFIYFNGEE
KVKDKDEITRINKLAIPPAWENVWICGIENGHLQATGIDAKNRKQYRYHPVWNALRNHTK
FYRMLQFGYALPKIRLNLEKDLSLKTLEKRKVLAVVVSLMERTNIRIGNSVYEKLYGSFG
LTTLKDKHVQITGQKINLSFKGKKGIYHDIDLRNRKLAKAVQNCKDIPGKELFQYYDADG
KRHAIDSGMVNEYIKEISGEDFTAKDFRTWSGTVNALIAFKEIGAAESDKTYKSKVKEAL
EMVASHLGNTATVCRKYYVHPLVINLYENNSIRKYLDELDEIEVDDGKSGLTREEKIVMK
ILENEKLK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgccagaaacagaccttgtggcttcgcttacaccggcaaaaatcgtgaagatt
atgaaggatccggtgaaatctgccaaagccgtacgccttatttataccaacgaccgcgaa
accagcggaattatccgcaaaaaaagcagagataaattcatctatttcaacggtgaggaa
aaagtaaaagacaaagacgaaatcacgaggattaacaaactcgccatcccacccgcgtgg
gaaaatgtctggatctgcggtatcgaaaacggccatttgcaggcaaccggtatcgatgcg
aaaaaccgcaaacagtaccgctatcatcctgtctggaatgcgcttcggaaccacacgaaa
ttctaccgcatgctgcagtttggttatgcgctgccgaaaataagactgaatcttgaaaaa
gacctctcactcaaaacattagagaaaagaaaagtactggccgtggtggtgagtctgatg
gagcgcacgaacatcaggatcgggaacagcgtctatgaaaaactttatggatcgttcggg
ctcacgacattaaaagacaaacatgtgcagattaccggacagaaaataaatctgtccttt
aaaggtaaaaaaggaatctatcatgatattgacctgcgcaaccggaagctcgcaaaagcg
gtacagaactgcaaagacatcccggggaaagaactcttccagtattatgatgcggacgga
aaaagacatgcgattgattcggggatggtgaatgagtacatcaaagaaataagcggcgaa
gattttaccgcaaaagatttcagaacctggtcaggaaccgttaacgcgctgattgcattt
aaagaaattggtgccgcggaaagcgataaaacctataaatctaaagtaaaagaagcactg
gaaatggtggcttcacatcttgggaatacggctacggtctgcagaaaatactatgtacac
ccgctcgtcatcaacctttatgaaaacaactcgatccggaaatatttggatgagctcgat
gaaattgaggtcgacgacggcaaatccggtctaacgcgcgaagaaaaaattgtgatgaaa
attcttgaaaacgagaaacttaaataa
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