Flavobacteriaceae bacterium 3519-10: FIC_01874
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Entry
FIC_01874 CDS
T00953
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fba
Flavobacteriaceae bacterium 3519-10
Pathway
fba00040
Pentose and glucuronate interconversions
fba01100
Metabolic pathways
fba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FIC_01874
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIC_01874
Enzymes [BR:
fba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
FIC_01874
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Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Por_Secre_tail
Motif
Other DBs
NCBI-ProteinID:
ACU08317
UniProt:
C6X1K4
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Position
2010876..2013368
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AA seq
830 aa
AA seq
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MNRFLFILSWLLSITLINAQAANITQQSGSLESAYVKWDPVTGADSYNVYYSGAGITDRK
IDTQLIRSYGTYFRADVLGLAAGSYTIKVVPVTEGVEGSPAVSNPIEVVAHDRNGFAHQG
SRVPGAYNLDGTLKSNAVVIYITQNTKNTVTLNVTGATANPCVGLQTILDGFKKGKDSRP
LAVRLIGNITDPSYLLSGDLVIENNNLATASMTLEGVGDDAYANGWGVRIKNASNVEVRN
LGLMLTDASEGDNIGLQQGNDHIWVHNNDLFYGKSGGDADQAKGDGAMDVKKSTYVTLSY
NHFWDSGKANLLGLSEGTAAGLYATYHHNWYDHSDSRHPRVRYYSAHVYNNYFDGNSKYG
AGSTMGSSLFLEGNFFRNSKYPMLTSMQGSDIFSGPGTFSSENGGVIKAFNNTMSGQNRF
VAYDAVNYPVEFDAYVATSRGEVLSSAIKAKKGGATYNNFDTDAAHYIKNLIVDEPEVAK
AKVIQYAGRVDGGDMKWTFTSADDTSYDVNTGLRDMLINYNSSMVYVQGETPVVVSTQTL
LIPENNDQTVPAGTPIQNMVFTWGGTANDVTVDGLPASGLTFTKNITAKTVTITGTPTAD
ISFTVTTSGTAGTPVSGTGIVTIGEASTESTFIHNFTTDGKISSYYAISGNMNSTDGSNT
YDGNILTKRLKIESATTINYTTAKKSTLTLVFDPTFAGKIKLNGTNYTVPAGAGGVITIP
NVPAGATQILKGDTANLFYIKTVYDDVVLGTGVQNTRAELSVYPNPVTETVFIRTDENVR
NVSIFSANGSLVKSADGNVKSIDVRGLTTGMYIVKIVTQSGTVTRKIIKK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatttctattcattttaagttggcttctcagcattacgctgattaatgcgcag
gctgccaacatcacccaacaaagcggctcgctggaaagcgcctacgtaaaatgggatccc
gtaaccggcgccgacagttataacgtatattattccggcgctggaattaccgacagaaaa
attgacacccaactgatccgcagctacggcacctatttccgtgcagatgtgttaggtctt
gccgcaggtagctatacaattaaagttgtaccggtgacagaaggtgtagaaggaagcccc
gcggtttcaaatccaatagaagtagttgctcatgaccggaacggcttcgcacatcaggga
agcagagtgcccggcgcctataacctcgatggtacacttaaaagcaatgcagttgtaata
tatatcacgcagaatactaagaatacggttacacttaacgttaccggcgctactgcaaat
ccatgtgtaggtcttcagaccatcctcgacggttttaaaaaaggcaaagacagcagaccg
ctcgccgtaagactcattggcaacatcaccgacccgagctatctgcttagcggtgacctc
gtgattgaaaataacaaccttgcaactgcatcgatgaccctcgaaggtgttggcgatgat
gcctacgcaaacggttggggagtacggattaaaaacgcttcaaatgtagaagtccgcaat
ttgggacttatgcttacggatgcgtccgaaggcgacaacattggtctgcagcagggcaat
gatcatatctgggtgcacaacaatgacctgttctacggaaaatccggtggtgatgcagac
caggcgaaaggcgacggcgcaatggacgtaaaaaaatcgacttatgtaaccctttcatac
aaccatttctgggacagcggaaaagcgaatcttttaggtttaagtgaaggtacggcggcc
ggactttatgccacctatcatcataactggtatgaccactcagattctcgtcatccaaga
gtgcgttattactcagcacacgtttataataactatttcgacggcaattcaaaatacggc
gccggatctacgatgggttcttcgctttttcttgaagggaactttttcagaaacagtaaa
tatccaatgctgacttctatgcagggatccgatattttttcaggtccaggtacgttctcc
agtgaaaacgggggtgtgattaaagcatttaacaacaccatgagcggacaaaacagattt
gttgcttacgacgcggtgaattatcctgtagaattcgatgcctatgttgccacaagcaga
ggcgaagtgctgagttcagctattaaagcaaaaaaaggcggagcaacctacaataacttt
gataccgacgcggctcattatattaaaaacctcatcgttgatgagcccgaagttgcgaaa
gcaaaagtaattcagtacgcaggcagagttgatggcggcgatatgaaatggacattcacc
tcggctgatgacacttcatacgatgtgaatacaggtcttagagacatgctgatcaactat
aacagcagcatggtttatgttcagggagaaacaccggtggtggtaagcacgcagacgttg
ctgatcccggaaaataacgaccagaccgtgccggcaggaacaccaatccagaacatggta
tttacatggggcggaaccgcaaacgatgttacagttgacggcttaccagcatcaggcttg
accttcacgaagaacattaccgctaaaaccgtaaccatcactggtacaccaactgccgac
atttccttcacagtaaccacttcaggcactgcaggtacaccggtttcaggtactggaatt
gttaccattggcgaagcttcaacggaaagcaccttcatccataacttcacgaccgatggc
aaaatcagttcctactacgctatttccgggaacatgaattctaccgacggatcaaacacg
tatgacggtaacatactaacaaaaaggcttaagattgaaagtgctaccacaatcaactac
actacagctaagaaatctacacttacgctagtattcgatcctactttcgcaggtaaaatt
aaactcaacggaaccaactacacagttcctgcaggcgccggcggagtgataaccatccct
aatgtaccggcgggtgccacccagattcttaaaggtgatactgcgaatctgttctacatc
aaaacagtatatgacgacgtggttttaggaaccggcgtacagaacaccagagcagaactc
agtgtatatccgaatccggttacagaaactgtattcatcagaacggatgaaaacgtgagg
aatgtaagcatcttcagcgccaacggaagtctggtaaaatcagcggatggaaacgtgaaa
tcaatcgatgtacgtggattaacaaccggcatgtatatcgtaaagatcgtcacacagtcc
ggaacagtaaccagaaagatcatcaaaaagtaa
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