Flavobacteriaceae bacterium 3519-10: FIC_01972
Help
Entry
FIC_01972 CDS
T00953
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fba
Flavobacteriaceae bacterium 3519-10
Brite
KEGG Orthology (KO) [BR:
fba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fba03009
]
FIC_01972
Enzymes [BR:
fba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FIC_01972
Ribosome biogenesis [BR:
fba03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FIC_01972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_11
N6_N4_Mtase
RrnaAD
PCMT
FtsJ
PrmA
Methyltransf_4
2-ph_phosp
UPF0020
Methyltransf_2
Saf-Nte_pilin
NpmA
Cytomega_gL
Motif
Other DBs
NCBI-ProteinID:
ACU08414
UniProt:
C6X1V1
LinkDB
All DBs
Position
complement(2137117..2138526)
Genome browser
AA seq
469 aa
AA seq
DB search
MRKSKKNIVLENIQLVSAGSKGVAIGKTNEGKTVLVSGAVPGDTVHARVKKSKSNYFEAE
AIEIVERSPHRVEPKCVHFGVCGGCKWQNLSYEKQLDIKQDEVFNHIKRIGGFEDFETMP
ILGSDEQYFYRNKMEFSFSNARWLTQYEISSEENFGNRNALGFHIPGMWSKILDLKECWL
QEDPSNYIRLAVNQYAVANGLEFFDVRNQEGFLRTLMLRQNSKGEWMVLFQLFRDEQENR
VKLFDFLLKEFPQIKSLVYCINSKQNDSIYDQHVVTYFGEGFLMEEMDGLQFKIGPKSFF
QTNYKQALQLYRKTLEFADLKGDEVVYDLYTGTGTIAQYVAKNAKKVIGIESVQEAINAA
KEHAKLNGLDNCTFYCGDMKDIFNDEFLANHPKADVLITDPPRDGMHQKVVEQILKLAPE
KIVYVSCNSATQARDMALMKDHYRLVKILPVDMFPQTHHVENIALLVKI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagtccaaaaagaacattgttttagaaaatatacagcttgtatcggccggctct
aaaggcgtggcaataggcaaaaccaacgaaggcaaaaccgtgttggtgtcgggcgcggtg
cccggcgatactgtgcatgcacgcgtaaaaaagtcgaaatcaaattatttcgaagctgaa
gcgatagaaatcgtggagcgctcaccgcatcgtgtagaaccgaaatgtgtgcatttcggc
gtgtgcggcggctgcaaatggcagaatctgtcttacgaaaaacaactcgatattaagcag
gacgaagtatttaatcatatcaaacgtattggcggtttcgaagattttgaaaccatgccc
attctcggcagtgatgagcagtatttttaccgcaacaaaatggagttttcattttcaaat
gcgcgctggctgacgcagtacgagataagctccgaagagaattttggcaaccggaatgca
ttgggctttcatattccgggcatgtggagcaaaattctggacttaaaggaatgctggctt
caggaagatccttctaattatatccgcttagccgttaatcagtatgcggttgcaaacgga
cttgaatttttcgacgtgagaaatcaggaaggttttttacggacattgatgctgcgccag
aattcaaaaggtgagtggatggttctatttcagctttttcgcgatgaacaggaaaaccgc
gtaaaactttttgattttttacttaaagaattcccacagattaaatctttggtttactgc
atcaattccaaacagaacgattcgatctacgatcagcacgtggtgacgtattttggcgaa
ggcttcctgatggaagaaatggatggtcttcagtttaaaataggtccaaaatcttttttc
caaaccaactataaacaggctctgcaactgtacagaaaaacccttgaatttgcagatctt
aaaggtgatgaggtggtttacgatctttataccggtacgggcacaattgcacagtatgtc
gcgaaaaatgccaaaaaggttattgggatcgagtcggtgcaggaagctatcaacgcggct
aaagaacacgccaaactgaacggacttgataactgcacattctattgtggcgacatgaaa
gacatcttcaacgatgaatttttagccaatcatcctaaagccgatgttctgattactgac
ccgccgagagatggtatgcaccagaaagtggtggaacagatcctgaaactcgcacccgaa
aaaatcgtttatgtaagttgtaattcggccacccaggcgcgcgatatggcgttgatgaag
gatcattaccgtctggttaagattttacccgtggatatgtttccgcagactcaccatgtc
gaaaatatcgcacttttagtaaagatttag
DBGET
integrated database retrieval system
