Flavobacteriaceae bacterium 3519-10: FIC_01995
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Entry
FIC_01995 CDS
T00953
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fba
Flavobacteriaceae bacterium 3519-10
Pathway
fba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FIC_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fba03021
]
FIC_01995
03400 DNA repair and recombination proteins [BR:
fba03400
]
FIC_01995
Enzymes [BR:
fba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FIC_01995
Transcription machinery [BR:
fba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FIC_01995
DNA repair and recombination proteins [BR:
fba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FIC_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ACU08437
LinkDB
All DBs
Position
complement(2164939..2165934)
Genome browser
AA seq
331 aa
AA seq
DB search
MAILTFIKPDKVILLNSDDFKGKFEFRPLEQGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQLRLKAKSEASAAETVTAKVTGQTTVTAGDLGKSIQ
GFEILNPDLVICNLNKEVKFELTFNIEKGRGYVPSDQNKTGSAPIGTIAIDSIFTPIKKV
QYSVENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLTDMDLSVRALNCLKAAEVETLGELVSYTKSDLMKFRNFG
KKSLTELEELVHAKGLNFGFDVAKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaacatttattaaacccgataaggtaatcttactcaactccgatgatttc
aaaggtaaatttgaattcagaccattggagcagggattcggattaaccatcggcaatgct
ttgagaagggttttactctcttctctggaaggatatgctatctcatctattaaaatagaa
ggcgtagagcacgaattttcaactattcccggcgttattgaagacgttacagaaattatt
ctgaatctgaagcaattaaggctaaaagctaaatctgaagcttctgcagcagagaccgtt
accgcaaaggttaccggccaaactactgttaccgcaggagacctaggaaaatcaattcag
ggcttcgaaattttgaaccccgatttggtgatctgcaatcttaacaaagaggtgaaattt
gaacttacgttcaatatcgagaaaggaagaggttacgttccgtctgatcagaacaaaacc
ggcagtgcgccaattggtaccattgcaatcgactctatcttcaccccgatcaagaaagtt
cagtacagcgttgaaaactatcgtgtagagcaaaaaacagactacgaaaaactcgttttg
gatattgagactgatggttccatcagccctcagaatgctttaactgaagcttcgaagata
ttaatctatcatttcatgttgttctccgacgagagaattactttggaaaccgaagccgtg
aaagcctccatccagtacgacgaagaaactttacatacacgtcagctccttaagtctaaa
cttacagatatggatctttcggtaagagcattaaactgcctgaaagctgctgaagtggaa
actttgggagaactggtttcttatactaagtctgatttgatgaaattcagaaatttcggt
aaaaaatctttaacagaattagaagaattggtgcatgcaaaaggtctgaacttcggtttc
gacgttgctaaatataaattagacgctgataaataa
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