Maribacter sp. HTCC2170: FB2170_04075
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Entry
FB2170_04075 CDS
T01306
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fbc
Maribacter sp. HTCC2170
Pathway
fbc03030
DNA replication
fbc03430
Mismatch repair
fbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FB2170_04075
03430 Mismatch repair
FB2170_04075
03440 Homologous recombination
FB2170_04075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbc03032
]
FB2170_04075
03400 DNA repair and recombination proteins [BR:
fbc03400
]
FB2170_04075
Enzymes [BR:
fbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FB2170_04075
DNA replication proteins [BR:
fbc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FB2170_04075
DNA repair and recombination proteins [BR:
fbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FB2170_04075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
HHH_3
PHP
Motif
Other DBs
NCBI-ProteinID:
EAR02432
LinkDB
All DBs
Position
complement(1182803..1185754)
Genome browser
AA seq
983 aa
AA seq
DB search
MAKENHVTQLVLTDINNTSAGLNFVRRAPEYDVRPILGIDFRNGVDQCYVGIAKNNEGYL
ELNNFLSEHLHKEEDLPAIAPRLQHTCIIYPFEKVLLNNQVSFADNEYIGISISDLRRLP
FSRLSKLEDKLVVQQPVTFRTKGDFNAHRLLRAIDKNMLLSKLDKTEEAKEDEKMFPIQN
LAAAFSEYSFILENTEKLMNACSIHFDFSKERQPQNLKTYNKTKEEDETMLEGLCQKGLP
YRYPNGGDGIIQRLQKELKLIKGMGFVSYFLINWDIVSYAQKQGFFYVGRGSGANSIVAY
LLRITDVDPMELDLYFERFINLYRANPPDFDIDFSHRDRPKITQYIFDRFEHVALLGTYV
TFKEKGVVRELGKVFGLPKSEIDFLSGGRYDISRLDEVSQLVVKYGRLIKNMPNYLSIHA
GGILISERPLHYFSATHLPPKGFATTMFDMVIAEDVGLYKFDILGQRGLAKIKETMDILE
HTRPDDFSKIDIHNINKFKEDPNVNNLIKTAQCMGCFYVESPAMRMLLKKLEVDNYLGLV
AASSIIRPGVSKSGMMREYILRHRNPGRDKEKGHPVMLDIMPETYGVMVYQEDVIKVAHH
FAGLDLGEADVLRRGMSGKFRSREEFQKVREKFIENCRKKGEDDKIIFEVWGQIASFAGY
AFAKGHSASYAVESYQTLFLRAYYPLEYMVAVLNNGGGFYRPEFYVHEARMLGATIHSPC
VNRSLNRNVIYGKGIFLGFGYLRELEHRVAERILKDRKVNGAYGSLEDFLDRVFISIEQA
SILIRIDAFRFTGVNKHQLLWKAHLFLNKNVKIDHPKLFPPKHQDFKIPQLYTTDLEMAF
TQLELLGFCLCSPFELLVEPPKNNRCVKDLERHLNRHIDIYGYLVTVKKTSTHNGKQMYF
ATFVDQQGEVFDTVLFPPVAAKYYFRGRGVYRFYGKVVSEFGFLSIEVIKMLKQDYVQDP
RYADMKMANKVFKEKEAKKTSAN
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaggaaaaccatgtgacccaattggtgcttaccgatatcaataacacctctgcc
gggcttaactttgtcagaagagctcctgaatatgatgtgcggccaatattggggattgat
tttagaaatggcgttgatcaatgttatgtgggtattgcaaaaaacaatgaagggtattta
gagttgaacaattttttgtcagagcatcttcacaaagaagaagacctgcccgctattgcc
ccacggcttcaacacacctgtattatttatccttttgaaaaagtattgctcaataatcaa
gtctcttttgccgataatgaatatatcggcatttcaatttccgacttacgacgtttgcct
ttttccagattatcaaaactggaggataaactggttgtgcaacagccggtcacttttcgt
actaagggcgattttaatgcccatcggttattgcgggccattgataagaatatgttgctc
agtaaattggataagactgaagaggccaaggaagatgaaaaaatgttccccatccaaaat
cttgcagcggctttttcggagtactcctttattttagaaaatacagagaagttgatgaat
gcctgttccattcattttgatttttcaaaggagagacaaccacagaacctcaagacatat
aataaaacaaaagaagaagatgagaccatgttggaaggactttgccaaaaaggcctacca
taccgatatccgaatggtggagatggtataatccaacgcttgcaaaaagagttgaagctc
attaaggggatgggttttgtatcctattttttaatcaattgggatattgtttcttatgcc
cagaagcagggttttttttatgtaggccggggtagtggagccaatagtattgtagcctat
ctgctacggattactgatgtggatcctatggaactggacctttattttgaacgttttata
aatctttatcgtgctaatccacccgattttgatattgatttttcgcatagagataggcct
aaaataactcaatatatttttgatcgctttgagcatgtggcccttttaggcacttatgtc
acttttaaggaaaaaggggttgtgcgtgaattgggtaaagtattcggacttccaaaaagc
gagattgattttttatcaggagggaggtacgatatttcaagactcgatgaggtttcacaa
cttgttgtgaagtacggccgcctgatcaaaaatatgcccaattatttgagcatacatgca
ggcggaatcttgatcagtgaaagaccattgcattatttctcggccactcatctacccccg
aaaggctttgccactaccatgttcgatatggtcattgctgaagatgttggtctctataaa
tttgatattctagggcaaaggggtttggcaaaaatcaaagagaccatggatattttggag
catacccgccctgatgatttttcaaaaatcgacattcataatatcaataagttcaaggaa
gaccccaatgtcaataacttaatcaagacggcacaatgcatgggttgtttttatgtggaa
tcccctgccatgcgaatgttgctcaaaaaattggaggtagataattaccttggtctggtc
gcggccagttctattatacgcccaggagtttctaaaagtggaatgatgcgtgaatatatt
cttcgccaccgaaatcctggtagggacaaagaaaaaggtcatcccgttatgctggatatc
atgcctgaaacctatggagtaatggtatatcaagaagatgtgatcaaagtggctcaccat
tttgcaggtcttgatctgggtgaggccgatgtgctgcgccgtggtatgagcggaaaattt
agatcacgagaagagtttcaaaaagtacgggaaaaatttatagagaactgcagaaaaaaa
ggagaggatgataaaatcatttttgaggtatggggacagattgccagttttgcaggttat
gcttttgccaaggggcactccgcatcatatgctgtagagagttatcaaacactttttttg
cgcgcctattatccgttggaatatatggtggccgtacttaacaatggaggcggattttac
cgtccagaattttatgtgcacgaggcgcgtatgctgggggcgaccattcattcaccttgt
gtcaatagaagccttaatcgcaatgtaatctatgggaagggtatttttctgggttttggt
tatttaagggaattggaacatcgggtcgccgaacgaattctaaaagatagaaaggtaaat
ggggcctatggatctctggaagattttctcgatcgggtatttatttccatagaacaagca
agtattcttattcgaatcgatgcttttcgatttacaggagtgaacaagcaccaattattg
tggaaagcccatttgttcctaaacaagaacgtaaaaattgaccaccccaaactgttcccg
cccaagcatcaagattttaagattccccaattatataccacagaccttgaaatggcattt
acccagttggaattgttgggattttgtctatgcagtccgtttgagttgttggtagaaccc
ccaaaaaacaatcgatgtgttaaggatttagaacgccacctgaatcggcatatagatatt
tatggttatttggtcacggtgaagaagaccagtacccataatggcaagcaaatgtatttt
gcgacttttgtggatcagcagggcgaggtgtttgatacagtgctttttccaccagtggcg
gccaaatattattttaggggtaggggcgtgtaccgtttctatggtaaggtggtgagcgag
ttcggttttttgagtatcgaggtcatcaaaatgttgaaacaggattatgtgcaagacccc
cgctatgcagatatgaagatggcgaacaaggtgtttaaggagaaagaagccaaaaagacc
agtgcaaattag
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