Maribacter sp. HTCC2170: FB2170_08589
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Entry
FB2170_08589 CDS
T01306
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fbc
Maribacter sp. HTCC2170
Pathway
fbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FB2170_08589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbc03019
]
FB2170_08589
03110 Chaperones and folding catalysts [BR:
fbc03110
]
FB2170_08589
03029 Mitochondrial biogenesis [BR:
fbc03029
]
FB2170_08589
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fbc04147
]
FB2170_08589
Enzymes [BR:
fbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FB2170_08589
Messenger RNA biogenesis [BR:
fbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FB2170_08589
Chaperones and folding catalysts [BR:
fbc03110
]
Heat shock proteins
HSP60 / Chaperonin
FB2170_08589
Mitochondrial biogenesis [BR:
fbc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FB2170_08589
Exosome [BR:
fbc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FB2170_08589
Exosomal proteins of other body fluids (saliva and urine)
FB2170_08589
Exosomal proteins of breast cancer cells
FB2170_08589
Exosomal proteins of colorectal cancer cells
FB2170_08589
Exosomal proteins of bladder cancer cells
FB2170_08589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
EAR00549
UniProt:
A4AU98
LinkDB
All DBs
Position
complement(2192780..2194414)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIKFDIEARDGLRRGVDALANAVKVTLGPKGRNVIISKSFGAPAVTKDGVSVAKEIE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQSIVKEGLKNVAAGANPMDLKRGID
KAVEAIVGDLTNQSKKVGDSSEKIKQVASISSNNDETIGELIAQAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMTADLENPYILLFDKKISSMKDLLPVLEPV
AQSGKPLLIIAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTKGTV
IAEERGFSLDNTTIDMLGTCEKVSIDKDNTTIVNGGGVAKNIKTRVNQIKSQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKNALSKVKADNADEETGLQIVARAIESPLRTIVENAGGEGSVVVAKVQDGKGDFGFDA
KSEKYVQMFKAGIIDPTKVTRVALENAASVSGMILTTECALTDIKEDTPPMPPMGGGGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacataaaatttgatatagaagcacgtgatggcttaagaagaggtgttgac
gcactggccaatgcggtaaaagtaacgttgggcccaaaagggagaaacgtaatcataagc
aaatcattcggagcgccagcagtaaccaaagatggggtttctgttgcaaaagagattgaa
ttggaagatgcacttgaaaatatgggtgcccaaatggtaaaggaagttgcttcaaaaacc
aatgaccttgcaggtgatggtacaacgactgctacagttcttgctcaatctatcgtaaaa
gaaggattaaagaatgttgcagcgggtgcaaacccaatggatttaaaaagaggtatcgat
aaggctgtggaggccatcgttggtgatttgacaaaccaatccaaaaaagttggtgactct
tctgaaaaaataaagcaagttgcttctatctcttcaaataatgacgaaacaattggtgag
ttgattgcccaggcttttggcaaagttggtaaagaaggtgtaattactgttgaagaagca
aagggtactgatacgtatgttgatgttgttgaaggaatgcaattcgatagaggatattta
tctccttacttcgtgaccgattcagaaaagatgactgccgatttagagaatccttatatt
cttttgttcgacaagaaaatctcttcaatgaaagacttacttcctgtattagagccagtg
gcacaatcaggtaaacctcttttgattattgccgaagatgttgatggtgaagcattagcc
actctagtggtaaacaagctaagaggatcattgaaaatcgctgctgttaaagccccaggt
tttggtgacagaagaaaagcaatgttggaagatatcgccatcttgacaaaaggaactgtt
attgctgaggaaagaggtttctctttggacaatacaaccattgacatgttaggtacgtgt
gaaaaagtatcaattgacaaagacaatactacgatagtaaacggtggtggtgttgctaaa
aacattaaaacacgggtcaatcagattaaatctcaaatagagacgacaacatctgactat
gataaagaaaaattgcaagagcgtttggctaaattggctggtggtgttgcagttctttat
gttggcgctgcctctgaggttgaaatgaaagaaaagaaagatagagttgatgatgcttta
catgcaacaagagctgcagtagaagaaggtattgttgccggtggtggcgttgccttagtt
cgtgcaaaaaatgctctttctaaagtaaaagcagataatgctgatgaggaaactggtcta
caaatagtagcaagagcaattgaatctcctttgagaactattgttgaaaacgctggcgga
gaaggttcagtagttgttgctaaagttcaagacggtaaaggtgactttggtttcgatgca
aaatcagagaaatatgttcagatgttcaaggccggaatcattgatcctactaaagtaaca
agagtagcattggaaaatgcagcttctgtttcgggaatgatcttgaccactgaatgtgca
ttgaccgacattaaagaagatacccctccgatgcctccaatgggtggcggtggcggaatg
cctggaatgatgtag
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