Maribacter sp. HTCC2170: FB2170_10389
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Entry
FB2170_10389 CDS
T01306
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fbc
Maribacter sp. HTCC2170
Pathway
fbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FB2170_10389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbc03019
]
FB2170_10389
03400 DNA repair and recombination proteins [BR:
fbc03400
]
FB2170_10389
Enzymes [BR:
fbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FB2170_10389
Messenger RNA biogenesis [BR:
fbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FB2170_10389
DNA repair and recombination proteins [BR:
fbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FB2170_10389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
TrmB
Cas3-like_C_2
zf-CXXC
HTH_65
NirdL-like_HTH
Mnd1
Motif
Other DBs
NCBI-ProteinID:
EAQ99714
UniProt:
A4AWJ6
LinkDB
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Position
complement(2622060..2623958)
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AA seq
632 aa
AA seq
DB search
MHKDPKSILEHYWGFKSFKGSQEKIINNVISERDVLALMPTGGGKSICFQVPALAKEGIC
IVVSPLIALIHNQVEALKSKGIKAIALTGGISFEEVNNLLDNCLFGNYKFLYLSPERLQQ
EIVRDRIQQMNVNLIAIDEAHCISQWGHDFRPAYLECSILREIIPSAPIITLTATATPKV
ARDIVENLKLINPLVVKDSFSRNNIAFSVVKEEDKRYSLRELCLTTKQSSIVYVRTRRMA
QDLTNYLNANKCSASYFHGGLSKEEKKERLNKWLDNKTNTMVATNAFGMGIDKPDVELVV
HYQIPDCIENYFQEAGRAGRNGNPAKAILLTNKNDEDQVKKQFLSVLPNISFIKLVYNKL
NNYFQIPYGEGYDENFQLNFNGFCETYGLNPLITYNAFKILDQNSVLALSEAFSKKTSLR
FITDKEQLFTYLEKNRNFADIIQTILRTYGGVFEFDTKINTTLIAKKAGVIEASVFETLR
QLMTDNIIEYQEQNSDLELTFLVPREDDITINVFAHKVKALNETKVKNIESMLVYINNTK
VCRSKQLLDYFGEKIQADCGKCDICKAKIPIDSDLKAFVSEELLKLLKNGGKSSRDLIKE
LVFDKQTILISIQSLLESGRIKINTLNEYELE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaggacccaaaatcaatcttagaacattattggggctttaaatcattcaaaggg
tcccaagaaaaaatcataaacaacgttatttccgaaagagatgtactggctttaatgcca
acaggtggaggtaaatcaatttgttttcaagttcctgcattggcgaaagaaggcatctgt
attgtcgtatctcctttaatcgcattaattcacaatcaagttgaagccctaaaatcaaaa
ggtataaaagccattgctttgaccggtggaatttccttcgaagaagtaaacaacctgctc
gacaattgtctctttggaaattataaattcctatacctctcccctgaacgcttacagcag
gaaatagttagagatagaattcagcaaatgaatgtaaatcttattgccattgatgaagca
cattgtatctctcaatggggacatgattttagaccagcttaccttgaatgttcgatatta
agggaaattatcccctctgcccctattattaccctaacggcaactgcgacccccaaagtt
gctcgtgatattgtagaaaatcttaagcttataaacccattagtggttaaagattcgttt
tcccgaaacaatattgctttctcagtcgtcaaggaagaagataaaagatatagcctaaga
gaactttgtcttacaaccaagcagagctcaattgtatatgtgcgcacccgaagaatggcc
caagaccttaccaattatctgaacgccaataaatgttcagcttcttattttcatggtggg
ctttcaaaggaagaaaaaaaagagagactaaataaatggttagataataaaaccaacacc
atggttgcaaccaatgcctttggtatgggtatagacaagccagatgtagagttggtagtt
cattatcaaattcctgattgtattgagaattattttcaagaagctggtagagctgggaga
aatggcaatcctgcaaaggcaattcttcttaccaataaaaatgatgaggatcaagtaaaa
aaacaatttttaagtgtattgcccaatatctctttcataaaattggtatacaacaaattg
aacaactattttcaaataccttacggtgaaggctatgatgagaattttcaactgaatttc
aatggattttgtgagacctatggtctaaatcctttgattacgtacaatgctttcaagatt
ctcgatcaaaattcggttcttgcactatcagaggcattctcgaagaaaacatcgctgcgt
tttataacagataaagaacagttgttcacttaccttgaaaaaaatagaaattttgccgat
attattcaaaccatattaagaacgtatggcggtgtttttgaatttgacactaaaatcaat
acgacattgattgccaaaaaagctggggtaattgaggcttcagtctttgaaacccttagg
cagttaatgacggacaatattattgaataccaagaacagaatagtgatttagaactgact
tttttagttccgcgtgaagatgacattaccataaacgtctttgcccataaagtaaaggcc
cttaatgagacaaaagtcaagaatattgaaagtatgttagtttacatcaataatactaaa
gtatgtcgcagtaaacagttgctcgattattttggggagaaaattcaagctgattgtggc
aaatgtgatatctgcaaagcgaaaatccctattgattctgacctaaaggcctttgtgtca
gaagagttattgaaattattaaagaatggaggcaaatcctctagggatttaataaaagaa
ttggtttttgataaacaaacaattcttatctcgattcaaagtctgttggaatcaggaaga
atcaaaataaacaccctaaatgaatacgagcttgaataa
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