Maribacter sp. HTCC2170: FB2170_11271
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Entry
FB2170_11271 CDS
T01306
Name
(GenBank) RNA polymerase sigma factor rpoD (Sigma-A)
KO
K03086
RNA polymerase primary sigma factor
Organism
fbc
Maribacter sp. HTCC2170
Pathway
fbc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fbc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FB2170_11271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbc03021
]
FB2170_11271
Transcription machinery [BR:
fbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FB2170_11271
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
EAR01297
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Position
complement(2810513..2811376)
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AA seq
287 aa
AA seq
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MRQLKIIKQVTNRESKSLDKYLQDISKIELINAQEEVELAQRIRAGDQVALEKLTTANLR
FVVSVAKQYQNQGLKLPDLINEGNLGLVKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRVVRLPLNKIGSINKIKKTFSYLEQAHERPPSAEEIAKELEMTVTEVKQSLKNTGRHV
SMDAPLRQGEDSNLYDVLRSGESPRPDKILLQQSLNTEINRALETLSPREADVVKLYYGI
GDQQSMTLAEIGQTFDLTRERVRQIREKAIRKLRHNSRSKLLKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaacttaagataatcaagcaggtaaccaatagagaatcaaaatcgttggacaag
tacctgcaggatatcagtaaaattgaattaataaacgcacaagaagaagtagaattagcg
caacgcatacgagccggggaccaagttgcacttgaaaaattgaccactgcgaatttaaga
ttcgtggtttcggtagcaaaacaatatcaaaaccaaggtttaaaactacctgatttgatc
aatgaaggtaatttagggcttgttaaggccgctaaacgatttgatgagacacgagggttc
aagttcatttcttatgccgtatggtggattcgtcagagtatactacaggcattggcggaa
caatcaagagtggttcgtctgcctttgaacaaaattgggtctataaacaaaatcaagaaa
actttctcttatttggaacaggcacacgaacgcccaccatctgcagaggaaattgcgaag
gagcttgaaatgacagttaccgaggttaaacagtctcttaagaatacagggaggcatgta
tctatggacgcaccattaagacaaggggaagactcgaatctttatgatgtacttcgttca
ggggaatccccaagaccggataagattttattacagcagtccttgaacacggaaatcaat
cgtgcattggaaactttgtcacccagagaggctgacgtagttaagctttattatggtata
ggagatcaacaatccatgaccttggctgaaataggacagacctttgatcttacacgcgaa
cgtgtacgacagatcagggaaaaggcaattcggaaattacgccacaactctagaagcaag
ttgttaaaaacatatttgggataa
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