Maribacter sp. HTCC2170: FB2170_12676
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Entry
FB2170_12676 CDS
T01306
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
fbc
Maribacter sp. HTCC2170
Pathway
fbc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FB2170_12676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbc03400
]
FB2170_12676
DNA repair and recombination proteins [BR:
fbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FB2170_12676
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FB2170_12676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
UvrA_DNA-bind
AAA_21
AAA_29
AAA_16
nSTAND3
RsgA_GTPase
AAA_23
DnaJ_CXXCXGXG
AAA_33
nSTAND1
AAA_18
AAA_22
AAA_25
ATPase
Viral_helicase1
AAA_24
NACHT
cobW
NTPase_1
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
EAR00275
UniProt:
A4AUM2
LinkDB
All DBs
Position
3125736..3128516
Genome browser
AA seq
926 aa
AA seq
DB search
MPSILDANPKENIIIKGAKLHNLKNIDVVIPRNKLVVITGLSGSGKSSLAFDTLYAEGQR
RYVESLSSYARQFLGKLNKPKVDYIKGIAPAIAIEQKVNSTNPRSTVGTTTEIYDYLKLL
YARIGRTISPKSGEEVKKDTVTDVVKHIKSYDEGEKLLLLAPIIIKEGRDPIKSLQLFSK
QGYARIKHIDKVIRIDAAPKDIGPKFSLVIDRIITKNDEDFYNRLANAIDSAFFEGKGEC
VIEELATKRQTIFNNKFEKDGMSFLEPNVHLFSFNNPYGACPKCEGYGDVIGIDEDLVVP
NTALSIFENAVFPWRGESMSWYRDELVNSAYKFDFPIHKPWFELTEEQRQLVWDGNSQFT
GLNKFFGMLEEKSYKIQNRVMLSRYRGKTKCNVCRGKRLRKETDYVKVDDHSISDLVELP
IKKLVLFFNDLSLNEYDSQIASRLLKEINTRLGFLEKVGLNYLTLNRKSNTLSGGESQRI
NLATSLGSSLVGSMYILDEPSIGLHPKDTENLIDVLKSLRDLGNTVIVVEHDEDIMNAAD
EVIDIGPEAGTHGGEVVAHGTLSEILKSTSLTAGYLNGTEKIVIPKERRVSTNYIEIKGA
RENNLKNIDVTFPLNMLTVITGVSGSGKSTLVKKLLYPVILKEVGGYGAKAGQFTSVDGK
YQTIKHVEFVDQNPIGRSSRSNPVTYIKAYDDIRALFASQKLSKIRAYQPKHFSFNVDGG
RCEKCKGEGEITVEMQFMADVHLECDTCSGKRFKKEVLEVKFENASIDDVLNMTIDDAID
FFEKYGQTKIVTKLTPLRAVGLGYVTLGQSSSTLSGGEAQRIKLASFLVKGTSKDKALFI
FDEPTTGLHFHDIKKLLKSFDALISRGHSVIVIEHNIELIKCADHIIDLGPEGGENGGQL
LAQGTPEEIIQSKTSFTANYLREKII
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaatactagacgcaaatccaaaggaaaatataattatcaaaggtgctaaattg
cacaatttgaaaaatattgatgttgttatacctcgaaataaattggtggtcataacggga
ctttcaggttcaggaaaatctagtttggccttcgacactttgtacgccgaagggcaacgt
aggtatgtagaaagtttatcttcttatgccaggcagttcctaggaaaacttaacaagccc
aaagtagattatataaagggtatagctcctgcgattgctattgagcaaaaagtcaattcc
acaaacccaaggtcaaccgttggtactaccacagaaatatatgactatctaaaactgcta
tatgcccgcattggtaggaccatttccccaaaatcgggcgaagaagtcaaaaaagatacc
gttacagatgttgtaaaacatataaaaagttacgatgaaggagaaaaacttctattactt
gctccgattataatcaaagaaggtagagacccaataaagtctttacagcttttttccaaa
caaggttacgcaaggattaaacatattgataaggttattcgaattgatgctgcaccaaaa
gacataggccctaaattcagtctcgtcatcgatagaatcatcacaaaaaatgatgaggat
ttttacaatagattggccaatgcaattgattctgctttttttgaaggaaaaggggaatgc
gtaatcgaagaacttgcaacaaaaagacaaaccattttcaataataagtttgaaaaagat
ggaatgtcttttttagaacccaatgtacatctgttcagttttaataatccatatggcgca
tgtccaaaatgcgaaggttatggtgatgtgattgggatagacgaagaccttgttgttccg
aatacggcactgtctatctttgaaaatgccgtttttccttggcgaggtgagagcatgagt
tggtatcgcgacgagttggttaactccgcctataaatttgatttccccattcacaaacca
tggtttgaacttacagaagagcaaagacaattagtttgggatggtaattctcagttcacc
ggacttaacaagttttttggaatgttggaggagaagagttacaaaatccaaaatagggtg
atgctttctcgttatcgaggcaaaaccaagtgtaatgtttgtcgcggtaaacgtctccgc
aaagaaactgattacgttaaagtagatgaccattccatttcagatttggttgagttacca
attaaaaagttagtgctcttctttaatgatctttccttgaacgaatatgattctcaaatc
gcctcacgattattaaaagaaatcaatacaaggttagggttcttagaaaaagttggtctc
aactaccttactctaaatagaaaatcaaatacgctctcaggaggcgaaagtcaaagaata
aacctagcaacctctttaggaagtagtcttgtgggttctatgtatattttggatgagcca
agtattggcttacaccccaaggacaccgagaatttaatcgatgtattaaaatcacttcgt
gatttgggcaataccgtcattgttgtggaacatgatgaagatataatgaatgcagctgat
gaagttattgatattggacctgaagccggaacacatggtggtgaggttgtggctcacggt
actttgtcagaaattttgaaatctacatcattaaccgcaggttatctgaacggaacggag
aaaattgtaatccctaaagagcggcgagtctctacaaattacattgagattaaaggtgct
cgggaaaacaaccttaaaaatatagatgttactttcccccttaatatgctcactgttatc
acaggtgtctcaggaagcggcaaaagtacgttggtcaaaaaattgttatacccagtaatt
ttaaaagaagttgggggttatggtgcaaaagcaggccagtttacttctgtagacggaaaa
tatcaaacaataaaacatgttgaattcgtagatcaaaaccctataggaagatcatcccgc
tcaaaccccgtgacttatatcaaagcctacgatgatattagagctctatttgcttcgcaa
aaactaagtaagatcagagcttatcagccaaaacatttttcttttaatgtagacggtggt
cgctgtgaaaaatgtaaaggtgagggtgaaattacggtggagatgcagttcatggccgat
gtacaccttgaatgtgatacctgcagcggtaaacgattcaaaaaggaagttcttgaggta
aaattcgaaaatgcaagtattgatgatgtcctgaatatgactattgatgatgcgattgac
tttttcgaaaaatatggtcaaaccaaaattgtaaccaaactaacccccctacgagctgtg
ggattgggatacgttactttagggcaatcttcttctaccctatcaggtggtgaagcgcaa
cgtataaagttggcttcttttctagtcaaaggaacttccaaagataaagccctgtttatt
tttgatgaaccaacaactggcttacattttcatgatatcaaaaaattactgaaatctttc
gatgccttgatttcacgcggacattctgttatagttattgagcataatattgaactcatt
aaatgtgcagatcatattattgaccttggtccagaaggtggagaaaatggagggcaacta
ctagcccagggtactccagaagaaataattcaaagtaaaacttcgtttacggccaattac
cttagagaaaaaataatataa
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