Maribacter sp. HTCC2170: FB2170_13688
Help
Entry
FB2170_13688 CDS
T01306
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fbc
Maribacter sp. HTCC2170
Pathway
fbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FB2170_13688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbc03019
]
FB2170_13688
03009 Ribosome biogenesis [BR:
fbc03009
]
FB2170_13688
Enzymes [BR:
fbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FB2170_13688
Messenger RNA biogenesis [BR:
fbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FB2170_13688
Ribosome biogenesis [BR:
fbc03009
]
Prokaryotic type
rRNA helicases
FB2170_13688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
EAR01584
UniProt:
A4AQ45
LinkDB
All DBs
Position
3327092..3328903
Genome browser
AA seq
603 aa
AA seq
DB search
MTKFEALGLQESLLNAVADMGFETPSEVQEKAIPILLEDETDLVALAQTGTGKTAAFGFP
LIQKIDSESRTTQGLILSPTRELCLQITNELKLYSKYEKSINVVAIYGGASITEQARQIK
RGAQIVVATPGRMKDMISRGLVNITKIDYCILDEADEMLNMGFFEDIKDILSNTPDEKST
WLFSATMPREVSVIAKKFMHSPKEITVGDKNSGATTVQHEYYVVGGRDRYPALKRLADTN
PDIFSVVFCRTKRDTQRVAEKLIEDGYNAGALHGDLSQNQRDLVMNSFRKKQIQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKSGISMVIVTRSEMRKIKAIENK
IKQKFISKKIPTGMEICEIQLYHLANKIKDTEIHEEVENFLPAINDVFQGIDREDLIKKI
VSVEFTRFYDYYNKKRDLNTVDSGDRGERRGDRGGNAPTSGSVRYFVNVGEKDGYDWMSL
KDFIRDTVGLGKEDVFKVDVKDSFSFFNTDADATEKILSTFTDFKVDGRFVNVEVSKNPG
GGGGRGRRDRSRSGGGRKDRDRRSSSGKGRDRNDSGKRRSKRSSGSGSSFSGNRRNKRKS
DFF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtttgaagcattgggactgcaagagtccttattaaatgctgttgccgatatg
ggttttgaaaccccttcggaagtacaggaaaaagcaatccccattttattggaagatgaa
accgatcttgttgccttggcgcaaacaggaactggaaagacagccgcatttggttttccc
ctaattcaaaaaattgatagcgaaagtagaaccacccaaggtttaatcctatcacctacc
cgtgaactctgtttgcagattacaaatgaacttaaactatactccaagtatgaaaaaagt
atcaacgtggttgcgatatatggcggagcaagtataacggagcaggcgagacagattaaa
agaggtgcccaaattgtagtggcaactccgggacgcatgaaagatatgataagtcgtggg
ttggtaaatattaccaaaatcgattattgtattcttgatgaagctgatgaaatgctgaac
atgggctttttcgaagatatcaaagatatactatctaataccccagatgaaaagtctact
tggcttttctctgctaccatgccaagagaggtatctgtaattgcgaaaaaattcatgcat
tcaccaaaagaaattactgttggtgataaaaattctggagctacgaccgtccagcatgag
tattatgttgttggcggaagggatcgttacccggctttaaaaagattggcagacacgaat
cccgatattttctctgtagttttttgcagaacaaaaagagacactcaaagggtggctgaa
aaattgattgaggacggatacaatgcaggtgctttacatggtgatctaagtcagaatcaa
agagacttagtcatgaattcttttcgtaagaaacaaattcaaatgctggtagccacagat
gtcgctgcccgaggaatcgatgttgacgatataacccatgtaattaattatcaactacct
gacgaaattgaaacttacacacaccgaagtggacgaacaggtagggctggtaaatctggg
atttcaatggtcattgttacacgtagtgaaatgcgtaaaatcaaggctattgaaaataag
ataaagcaaaaattcatttcaaaaaagattcctaccggaatggaaatatgcgaaatacag
ctttatcatttagcaaataaaattaaggacacagaaattcatgaggaggtggaaaacttt
cttcctgccataaatgacgtgtttcaaggaattgacagagaggatcttataaagaaaata
gtctctgttgagttcacaagattctatgattattacaacaaaaagagagatttaaatacc
gttgactccggagatagaggagaacgaagaggtgatcggggtggaaatgccccaaccagt
ggttccgttaggtattttgtcaatgtgggcgaaaaagatggttatgattggatgtcacta
aaagattttattagggatacggttggtcttggtaaagaagatgtgtttaaagtagatgtt
aaggatagcttctctttctttaacacagatgccgatgctacggaaaaaatattatccacc
tttaccgattttaaagtagatggtcgatttgtcaacgtggaagtttcgaaaaatcctggc
ggcggtggaggtcgcggaagaagggatcgaagtcgcagcggcggaggaagaaaagatcgt
gaccgtaggtctagtagtggaaaaggtagagatagaaatgactctggaaagagaagatcg
aaaagatcatctggtagcgggtccagtttttctggaaatagaagaaacaagcgtaaaagt
gatttcttttag
DBGET
integrated database retrieval system
