Aureibaculum algae: FF125_04960
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Entry
FF125_04960 CDS
T06009
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fbe
Aureibaculum algae
Brite
KEGG Orthology (KO) [BR:
fbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbe03032
]
FF125_04960 (topA)
03400 DNA repair and recombination proteins [BR:
fbe03400
]
FF125_04960 (topA)
Enzymes [BR:
fbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FF125_04960 (topA)
DNA replication proteins [BR:
fbe03032
]
Prokaryotic type
DNA Topoisomerases
FF125_04960 (topA)
DNA repair and recombination proteins [BR:
fbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FF125_04960 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QCX37816
UniProt:
A0A5B7TRR7
LinkDB
All DBs
Position
complement(1256938..1259436)
Genome browser
AA seq
832 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFQVESSYGHIADLPSRELGVNVEGDFTPEYIVSDDK
KAVVKKLKSLAKKADTVWLASDEDREGEAIAWHLFEQLKLDLENTKRIVFHEITKTAILK
AVENPRSINYNLVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVAVRLIVERER
EIESFNPIASYRIDAEFSNEEGKTFKAKLPKNFETREAAEKFLKSCTGAAFKVADLQTKP
AKKSPAAPFTTSTLQQEASRKLYFPVAKTMIMAQRLYEAGLITYMRTDSVNLSEDAKNAA
AEEITSSYGSEYSNPRNFKSKSKNAQEAHEAIRPTDMSLHESSIGKDEDRLYSLIWKRTL
ASQMSDAKLERTNVKISNTKNKQILTANGEVITFEGFLKVYLEGTDNEDEEQEGMLPKLA
VNETLKNNYITATERYTRAPGRFTEASLVKQLEELGIGRPSTYAPTISTIQRREYVDKGS
IDGVERKYTELKLKSDKLTEKELTEKVGSDKGKLVPTDIGKIVNDFLVEHFKTVLDFGFT
AKVEEEFDDIARGKEDWTSMIKDFYEKFHPRVEDVSENAERAKGERLLGIDPESGKNVYS
RLGRFGAMVQIGEVTDEEKPKFASLQLGQTLETVTYEEAMDLFKLPKTIGEYEGEEIIVN
NGRFGPYVKFGTKFISLDKGENPMDVDMERATVLIKAKQEADAPIAHYKELPVQKGVGRF
GPFIKYDGMFINVNKKYDFDNLTQANIEELIEVKIQKEIDKLIHNWEEEGIRVEKARWGR
FNIIKGKLKIEMPKTTDAEKLTLEEVLEIIEKKTPKKKPRKKAAKKPAKKKK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttagtaattgttgagtcacctgcaaaagcaaaaaccattgaaaaattt
ttaggtaaagattttcaggttgaatcgagttatggtcatattgccgatctgccttcaagg
gaattaggtgtaaatgtagaaggagattttactccagaatacattgtttctgatgataag
aaggcggtagtaaaaaaattaaaaagtcttgccaaaaaagcagataccgtatggctagct
agtgatgaggatcgagagggtgaagcaattgcatggcatttatttgagcaattaaaatta
gatttagagaatacaaaacgaattgtttttcatgagattacaaaaacagcgattctaaaa
gctgttgaaaatccgagaagcatcaattataatttagttaatgcacaacaagcccgtagg
gttttagataggttggtaggttatgaactttcacctgttttatggcggaaagtaaaagga
ggattatcagcaggtagggtacaatcagttgctgtacgtttaattgtagaacgcgaacgt
gaaattgaaagttttaatcctattgcttcttacagaatagatgctgaatttagcaatgaa
gaaggtaaaacttttaaagctaaactcccgaagaattttgagacaagagaagccgctgaa
aagtttttaaaatcttgtacaggtgcagctttcaaagtagctgatttacagacaaaacca
gcaaaaaaatcaccagcagcaccatttacaacctcaactttacaacaagaagcctctcgt
aagttatattttccagttgccaaaacaatgattatggcacaacgcttatatgaagcggga
cttataacatacatgaggacagatagtgtaaacttatctgaagatgctaagaacgcagct
gctgaagaaatcacatcatcatacggttcagaatatagtaacccaagaaatttcaaatct
aagtctaaaaatgctcaagaagctcacgaagcgattcgacctactgacatgagcttacat
gagtcttcaataggtaaagatgaagatagattatatagtctaatttggaaaagaacctta
gcctctcaaatgagtgatgctaagttagaacgtaccaacgtaaaaattagcaacacaaaa
aataaacaaattttaactgctaatggagaggtaatcacttttgaaggctttttgaaagtt
tatttagaaggtacagataatgaagatgaagaacaagaaggcatgttacctaaacttgct
gtaaacgaaacgttaaaaaataattacattaccgcaaccgaacgttatacaagagctcct
ggtagatttacggaagcttctttagtaaaacaattggaagaattgggtattggtcgtccg
tcaacatatgcacctactatctctacaattcaacgtagagagtatgtagacaaaggctct
attgatggtgtagaacgaaaatatacggagctaaaacttaaatcggataaacttactgaa
aaagaacttactgaaaaagtaggttctgataaaggcaagttggtacctaccgatatcggt
aaaattgtaaatgactttttagttgagcattttaaaacagtattggattttggttttaca
gcgaaagttgaagaagaatttgatgatattgctagaggtaaagaagattggacctcaatg
ataaaagatttttatgaaaaatttcatccaagagttgaagatgtttctgaaaatgcagaa
agagctaaaggtgaacgtttattaggaatagaccctgaatctggcaaaaatgtgtattcg
cgtttgggtagatttggtgctatggtacaaattggtgaagttacagatgaagaaaaacct
aagtttgctagtttacaactaggtcagacgttagaaacggtaacttatgaagaagctatg
gatctttttaaattacctaaaacaataggtgaatatgaaggtgaagaaattattgtaaat
aatggtaggtttggaccttatgtgaagtttggaacaaaattcatttctttagataaaggt
gaaaaccctatggatgttgatatggaaagagccactgtgcttattaaggccaaacaagaa
gctgatgcaccaattgctcattataaagagttacctgtgcaaaaaggtgtgggtagattt
ggccccttcattaaatatgatggcatgtttatcaatgtaaacaaaaaatacgattttgat
aacttgactcaagctaacattgaagagttgattgaagttaaaattcaaaaagaaatagat
aaacttattcacaattgggaagaagaaggaattagagtagaaaaagcaagatggggcagg
tttaatattattaaaggcaaacttaaaattgaaatgcctaaaacgactgatgccgaaaaa
ttgaccctggaagaagtgctagaaattattgaaaagaaaactcccaagaaaaaaccaaga
aaaaaggctgctaaaaaaccagctaaaaagaaaaaataa
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