Aureibaculum algae: FF125_05415
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Entry
FF125_05415 CDS
T06009
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
fbe
Aureibaculum algae
Brite
KEGG Orthology (KO) [BR:
fbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fbe03021
]
FF125_05415 (rapA)
Transcription machinery [BR:
fbe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FF125_05415 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Helicase_C
SNF2-rel_dom
Tudor_1_RapA
ResIII
DEAD
Tudor_RapA
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QCX37899
UniProt:
A0A5B7TM91
LinkDB
All DBs
Position
complement(1365366..1368191)
Genome browser
AA seq
941 aa
AA seq
DB search
MEIFFPNQRYTSKGEPDLGVGILKEASKEKVQIYFPLSNETRLYAVESAPLQRVVFKIGD
TIMDAKGQPLLIEHVEIVNNLYVYYGKDKKITEAALGDVSANHSVDDRLFMGDVDTPQAF
ALRRETLQHEYKRRLSPVHGFVGGRIDLIPHQLYIAHEVSSRYAPRVLLSDQVGLGKTIE
ACLILHRLLLSGRISRVLILVPESLLHQWFVEVLRRFNMWFNIFDEERCAALDDNAPDGN
PFLDNQLIICSTEFLAGSAKRTKQAISANWDMLVVDEAHNLEWSVNNISPEYRIVELLSK
VAKGLLLLTATPEQLGVESHFARLRLLDPNRYENYNDFINESSNHKSIASIVEKLHLGKP
LESKDTKILEAIFSKESIQLVIDGKNEAKDNLIENLLDQHGPGRVLFRNTRSGMSGFPKR
KAHLIPIKVEKDKELWLERLSNEFAFEMTPDETANNQQFWFAKDPRVQWLLTTIKELYPA
KVLLICKQKEKVLALEEILTKRGNFKVGVFHEDLTIVQRDRNAAWFSEPDGAQILLCSEI
GSEGRNFQFAHHLILFDLPLNPELLEQQIGRLDRIGQKKDIHIHIPYLTNSPQHILVRWF
HEGLNAFEKNIEGGNKISKLFSNRLLELSKLNTEAAHKSALEALIMETSTFQKELQKSLA
DGRDKLLEMNSFRPKIATKLIKQIQAEDSDKSLENYMTKVFNHFDIEMEDLASRSYHLKP
TSLITEIFPSIPMEGIGVTFDRKHALSREEISFLSWDHPMTTDAIDMVLSSGTGSASYGV
LKGSKSPGLLLELIFILETPTRQNIAVDRFLPNTPLRVVVDHAGNEVTEEYPVDVLNKKL
IPGQIDALLDNEAIVETLLPNMIAVATKLAKEMSNKAIANGLDSMNLTLNHEIGRLKLLQ
EKNNNIRPEEIQIACDDQIALTEIIKNARVRMDAIQLIRKE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggagattttttttccaaatcaaagatatacgagtaaaggtgaacctgatttaggggtt
ggtattttaaaagaagctagcaaagaaaaagtacagatctattttcccttgtctaatgaa
acacgattatacgcagttgaaagtgctcctttacaacgcgttgtttttaaaattggtgat
acaataatggatgcaaaagggcaaccattacttatagaacatgttgaaatagtcaacaat
ctatacgtctattatggcaaagacaaaaaaataactgaggcagcacttggtgatgtgtca
gcaaatcacagtgtagatgaccgtctttttatgggagatgtagacacgccacaagccttt
gctttgcgtagagaaacattacaacacgaatataaacggagattatcgcctgtacatgga
tttgtaggcggaagaatcgatcttattccacatcaattgtatattgcacatgaagtgagt
tcaaggtatgctcctcgtgtcttactttctgaccaagttggacttggtaaaactattgaa
gcttgcttaatccttcatcgtttattattgagcggacgcatttctagagtgctcattctt
gttcctgaatcgttattacatcaatggtttgttgaagttttacgtcgatttaatatgtgg
tttaatatttttgatgaagaacgttgtgcagcacttgatgacaatgcacctgatggtaat
ccttttttagacaatcaacttataatttgtagtactgaatttttagccggttctgccaag
cgaacgaagcaggcaatttcggctaactgggatatgcttgtggttgatgaagctcataat
ctggaatggtctgttaacaacataagcccagagtatcgaattgtagaacttttgagtaaa
gttgcaaaagggttattactgcttacggctacaccagaacaattaggcgtagaaagtcat
tttgcacgactccgattacttgatcctaacaggtatgaaaactataatgattttataaat
gaatcttcaaatcataaaagtattgcctctattgttgaaaaattacatctaggaaaaccc
cttgaatctaaggatactaaaattttagaagctattttttcaaaagaaagcatacaatta
gtaattgatggaaaaaatgaagccaaggataatcttattgaaaacctactagatcaacat
ggtccaggcagagtattattccgaaatactagatctggaatgagtggctttccaaaacga
aaggcacatttaattcccataaaagtagaaaaagacaaggagctgtggttagaacgttta
agcaatgaatttgcttttgaaatgactccagatgaaactgcaaataatcaacaattttgg
tttgccaaagatccacgtgtccagtggctgttaaccactataaaagagctttatcctgca
aaagtactactgatttgtaagcagaaagaaaaggtgctggctttagaagaaatcttaaca
aaacgtggaaattttaaagttggtgtatttcatgaagatcttaccatagtgcaacgcgat
agaaatgcggcatggttctcagaacccgatggtgctcaaatactgctttgttcagaaata
ggaagtgaaggacgaaattttcaatttgctcatcacctcatcttatttgatttgcctttg
aatcctgaattgttagaacagcaaataggacgcctagacaggattggtcaaaaaaaagat
attcatattcatatcccctaccttaccaatagtccacaacatatacttgtaagatggttt
catgaaggcctgaatgcctttgaaaagaacattgaaggtggaaataaaatttctaaatta
tttagtaatcggctacttgaactatcaaaactaaacactgaagctgcacataaatcagca
ttagaagctttgattatggaaacgtcaactttccaaaaggaactacaaaaaagtctagcc
gatggcagagataaattactagaaatgaattcttttcgcccaaaaatagccacaaaatta
atcaaacaaattcaagcagaagacagcgataaaagtcttgaaaattatatgacaaaagtc
tttaatcattttgatattgaaatggaagacctcgcttctcgaagctatcatttaaaacct
acgtctctaatcactgaaatttttccgtcgatacccatggaaggcattggcgttacattt
gacagaaaacatgctcttagcagagaggaaatcagttttctaagttgggatcatcccatg
accaccgatgccatagatatggtgttaagttcaggtacaggtagtgctagctatggagtt
ctcaagggaagcaaaagccctggtcttctacttgaactcatttttattcttgaaacacca
acacgacaaaacatagctgtagaccgttttctacccaacacaccactaagagttgttgta
gaccatgcgggtaatgaggttacagaggagtatcctgttgacgtattaaacaaaaaatta
atacctggtcaaatagacgctttactggataatgaagccatcgttgaaacactactgccc
aatatgattgcagtggctacaaaattagctaaagagatgagcaacaaagcaatagcaaat
ggtttagatagtatgaacttaacgttgaatcatgaaattggcagactaaaactattacaa
gagaaaaacaataatataagaccagaagaaattcaaatagcttgtgatgaccaaatagct
ctaactgaaatcattaaaaacgcacgtgtaaggatggatgctattcaattgatcagaaaa
gagtaa
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