Aureibaculum algae: FF125_12565
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Entry
FF125_12565 CDS
T06009
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fbe
Aureibaculum algae
Pathway
fbe03030
DNA replication
fbe03430
Mismatch repair
fbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FF125_12565 (holA)
03430 Mismatch repair
FF125_12565 (holA)
03440 Homologous recombination
FF125_12565 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbe03032
]
FF125_12565 (holA)
03400 DNA repair and recombination proteins [BR:
fbe03400
]
FF125_12565 (holA)
Enzymes [BR:
fbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FF125_12565 (holA)
DNA replication proteins [BR:
fbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FF125_12565 (holA)
DNA repair and recombination proteins [BR:
fbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FF125_12565 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QCX39228
UniProt:
A0A5B7TSP1
LinkDB
All DBs
Position
complement(3002761..3003765)
Genome browser
AA seq
334 aa
AA seq
DB search
MERINQIVSDIKNGNIKPIYFLMGEESYYIDKISDYIERKVLTEEEKGFNQMVLYGRDVS
IDDIVSNAKRYPMMAERQVVIVKEAQDLSRTIENLVSYVENPQPSTVLVICYKYKTLDKR
KKLSKIIGKNGLLFESKKLYENQVGDWIRRVLAGKGYQIEPKAALMLVEFLGTDLSKIAN
ELEKLMVVLPKESLIRPIHIEENIGISKDFNNFELRKAVGERELVKANQIINYFAENPKS
NPLVVTISLLNSFFTQLLIYHGLSDKSKGNVARALRVNPYFVGDYVNAARNYPMRKVSQV
VAYLREADLKSKGVGAQNMPNGDILKELLFKVMH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcatcaatcaaatagtttctgacattaaaaacggaaatatcaaacccatttat
tttttaatgggtgaagagtcgtattatattgataaaatatcagattatattgaacgtaag
gtgcttaccgaagaagaaaaaggatttaaccaaatggtattgtatggtagagatgttagc
attgatgatattgtttccaatgcaaaacgttatccaatgatggctgaaaggcaagtggtt
attgtaaaagaagcccaagacctatcaagaacaatagagaatttggtttcttatgttgaa
aacccacagccttcaacagttttggttatatgttataaatataaaaccttagataaacgt
aagaagttaagtaaaattataggaaaaaacggactgctatttgaaagtaagaaactatat
gaaaatcaagtcggtgattggattcgtagagtattagctggtaaagggtatcaaattgag
ccaaaagcggctttgatgcttgttgaatttttaggaactgatctttctaaaattgcaaat
gaactggaaaagttgatggttgtcttacctaaagaaagtttgattagacccattcatatt
gaagagaatataggaatcagtaaagattttaataattttgaattgcgtaaggcagtagga
gaaagggaattggtaaaagcgaatcagattataaattattttgctgaaaaccctaaaagt
aatcccttagtggttacgatctctttactcaatagtttctttacacagctattaatttat
catggtttatcagataaatcaaaaggaaatgttgccagagcattacgggttaatccttat
tttgtgggtgactatgtaaatgctgcacggaattatccaatgcgaaaagtatcacaagtt
gtcgcttatttacgagaagcagatctcaaaagtaaaggtgttggtgctcaaaatatgccc
aatggagatattctgaaagagttgttattcaaggtgatgcattaa
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