Aureibaculum algae: FF125_12970
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Entry
FF125_12970 CDS
T06009
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fbe
Aureibaculum algae
Pathway
fbe03420
Nucleotide excision repair
fbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FF125_12970
03430 Mismatch repair
FF125_12970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbe03400
]
FF125_12970
Enzymes [BR:
fbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FF125_12970
DNA repair and recombination proteins [BR:
fbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FF125_12970
MMR (mismatch excision repair)
Other MMR factors
FF125_12970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QCX39303
UniProt:
A0A5B7TVG8
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All DBs
Position
complement(3095654..3098005)
Genome browser
AA seq
783 aa
AA seq
DB search
MTNYLEELNEAQRAAVVQKDGAMIIIAGAGSGKTRVLTYRIAHLMKQGVDSFSILALTFT
NKAAREMKNRIAKMVGDSEAKNLWMGTFHSVFARILRSEADKLGFPRNFTIYDTQDSVRL
ISTIIKEMQLDKDRYKSKQVLSRISSFKNSLITVKAYYANSELQETDKMANRPKIGEIYQ
QYVDRCFKAGAMDFDDLLLRTNELLTRFPDVLAKYQDRFRYIMVDEYQDTNHSQYLIVRA
LADRFQNICVVGDDSQSIYAFRGANIQNILNFQRDYEEVKIFKLEQNYRSTSNIVEAANS
VIDKNKTKLDKEIWTDNDKGEKVKIMRTLSEGEEGRFVANSIFDNKMNHQLKNEDFAILY
RTNSQSRAIEDALRKKDITYRIFGGLSFYQRKEIKDILSYLRLIVNPNDEEALKRVINYP
ARGVGQTTIERLSVAANHYKKSIFEILENIDKVDVKINASTKLKLHNFVTMVKTFQIEAE
TKNAFEVADFVVKQTKIIKELEKDEAPEAVSKVENVQELLNGIKDFIDEQNEEKEDGEER
KTDTSLAYFLEDVALATDLDNEKNKDVDSVSLMTVHMAKGLEFQYVYIVGLEENLFPSAM
SMNTRSELEEERRLFYVALTRAEKQAYLSYAHSRYRWGKLVDCEPSRFLEEIDDKYIDFM
TPKVSPNINKFINEDIFGDVPQDKVRFKKPVKREVVKPKGKQKSTPETIQISTPKNLKKV
SNINQNLFDSNITVGNVVEHTKFGKGEVVNLEGVGSNKKAEINFDSVGSKKLLLQFAKLK
ILG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaactacctagaagaattaaatgaagctcagcgagctgccgttgtacaaaaagat
ggtgctatgattattatagcgggtgccggctctggaaaaacccgtgttttgacgtacaga
attgctcatttgatgaagcaaggagtggactctttcagcattttggcattaacctttaca
aataaggcggcccgtgaaatgaagaatagaattgccaaaatggtgggagatagtgaagct
aaaaatttatggatgggtacttttcactctgtttttgctcgaattttacgatcagaagca
gataaattaggctttcctagaaattttactatttacgatacgcaagattctgttagactg
atttctacgattataaaagaaatgcagttagacaaagatagatataagtcaaaacaagtg
ttgagccgtatttcttcttttaaaaacagtcttattacagtaaaggcctattatgctaat
tctgaattgcaagagacagataaaatggcaaatcgtcctaaaataggtgagatttatcag
cagtatgtagatcgttgttttaaagcaggtgcgatggattttgacgatttattgttgaga
accaatgagcttttaacacgttttcctgatgtcttggcgaagtatcaagatagatttaga
tatataatggttgatgagtatcaagataccaatcactctcaatatttaattgtgagagcc
ttagcagatcggtttcaaaatatttgtgtagttggtgatgattctcaaagtatttatgct
tttaggggagcaaatattcaaaatattttaaatttccaacgggattacgaagaggttaag
atttttaaattagagcaaaattatagatctactagtaatattgtagaagctgccaatagt
gttattgataaaaataaaaccaaattagataaagaaatttggacagataatgataagggg
gaaaaagtaaaaataatgcgtaccctttcagaaggggaagaaggtcgttttgtggcgaat
tcaatttttgataataagatgaatcatcaactcaaaaatgaagactttgccattttgtat
cgaacgaattctcaatcaagagctattgaagatgctttacgaaaaaaagatattacctat
agaatatttggtggattatccttttatcaacgtaaagaaattaaagatatattgtcttat
ttacgcttaattgtaaatcctaatgatgaagaagccttaaaacgtgtaataaattatccg
gcaaggggagtgggtcaaactacaattgaaagattaagtgttgctgctaatcattataaa
aaatctatttttgaaattcttgaaaatatcgataaagtcgatgtgaaaattaatgcaagt
acaaaattaaaactacataattttgtaacgatggtgaagacttttcagatagaagcagaa
actaagaatgcgtttgaagttgctgattttgttgtaaaacaaaccaaaataattaaggag
ttagaaaaggatgaagctccagaagcggttagtaaagttgaaaatgttcaagaattatta
aacggaattaaagattttattgacgagcaaaacgaggaaaaagaagacggagaagaaaga
aaaacagatacttcacttgcttactttcttgaagatgtggccttagctactgatttagat
aatgaaaaaaacaaggatgttgatagtgtttctttaatgactgtgcacatggcaaaggga
ttagagtttcaatatgtatatattgttggtttggaagaaaacttatttccttcagcgatg
agtatgaacacgcgaagtgaactggaagaagagcgtcgtttgttttatgtagctctaact
agggctgaaaaacaggcctatttatcatatgcacattcaagataccgatggggtaaacta
gtagattgtgaaccaagccgattcttagaagaaatagacgataagtatatcgattttatg
acgccaaaggtttctccaaatattaataaatttattaatgaagatatttttggtgatgtt
cctcaagataaagttcgctttaaaaaacctgtaaaaagagaggtggttaaacctaaaggt
aaacaaaaatcaactccagaaacgatacagataagtacaccaaaaaacctaaaaaaggta
agtaatattaaccaaaatctatttgatagcaatattaccgttggtaatgtagttgagcat
accaagttcggtaagggtgaagttgttaacttagaaggtgttggttctaataagaaagct
gaaataaactttgattcagttggaagtaaaaaattactattacaatttgccaaacttaaa
attttaggttaa
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