Aureibaculum algae: FF125_15465
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Entry
FF125_15465 CDS
T06009
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
fbe
Aureibaculum algae
Pathway
fbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FF125_15465 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbe03400
]
FF125_15465 (uvrA)
DNA repair and recombination proteins [BR:
fbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FF125_15465 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FF125_15465 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
nSTAND3
AAA_22
DnaJ_CXXCXGXG
AAA_18
AAA_25
AAA_21
Viral_helicase1
cobW
MeaB
AAA_15
AAA_23
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QCX39768
UniProt:
A0A5B7TU58
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All DBs
Position
3682254..3685073
Genome browser
AA seq
939 aa
AA seq
DB search
MSENYIDVQGARVHNLKNIDVKIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIETFS
AYARQFLGGLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEVYDFLRLLFARAADA
YSYNSGEKMVSYSDEQIIDLILTDFDSKKVNILAPVIKSRKGHYRELFEQISKQGFVKVR
VDGQVIDIEKGMRLDRYKTHDIEIVIDRLLVEKKQQKRVEETIKTAMYHGDDTILVLDVE
TNKTRYFSRSLMCPTSGISYPKPEPNSFSFNSPKGACDNCNGLGTVNEVNIDKIIPDPEV
SIANGGIAPINEQKSKWILKQIELIAERYQFKLTTPINKIPKEGLDVILYGGKEKFEVLS
KEMGITRSYSIDFEGIVNFIKYQFDETSSVSIKRWASTYMDENNCSVCGGSRLKVESLHF
KIQGKNIADLADMDIVQLADWFKKVKNKLSKKQTAIASEIIKEIETRIQFLLDVGLDYLA
LNRSSKTLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNHRLIDSLQKLRDIGN
SVLVVEHDKDMIEQADYVIDIGPKAGKFGGEIISSSTPKELLKSHTLTADYINGTKKIEI
PNKRRIGNGKVLILKGATGNNLKNVTVTLPLGKMICVTGVSGSGKSTLINETLYPILNQH
IYRGVKVPMPYKSITGLEHVDKIIDINQSPIGRTPRSNPATYTGVFSEIRNLFAKTPEAL
IRGYKPGRFSFNVKEGRCETCEGGGVRVIEMNFLPDVYVECETCMGKRFDRETLEIRYKG
KSISDVLNMTIDESVKFFEHIPKIHRKVKTIKDVGLGYITLGQQSTTLSGGEAQRIKLAT
ELSKKDTGNTFYILDEPTTGLHFEDIDVLMKVLNKLTDKGNTVLIIEHNLDVVKLADYII
DIGPEGGKNGGNVLCTGTPEEIIKVETSYTAQFLKKELH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaactatatagatgttcaaggggcaagagtccataatttaaagaacattgat
gttaaaatacctagagagaaacttgttgttattactggcttaagtggtagtggaaaatcg
tcattggcttttgacactatttatgcggaaggacaaagaaggtatattgaaactttttca
gcttatgcccgacagttcttaggaggattagaacgacctgatgttgacaaaattgatggt
ttatctccagtaattgctattgagcaaaaaactacgagtaaaagtccgcgatctacagta
ggcacaattacggaagtttacgattttttaaggttattatttgcccgagcagctgatgct
tattcttacaacagtggtgaaaagatggtcagctattcagatgaacaaattattgatttg
attttaactgatttcgattctaaaaaggtaaatatattagctcctgttattaaatcccga
aagggacattatcgtgaactttttgagcaaatttcgaaacaaggatttgttaaagttcgt
gtagatggtcaagttatagatattgaaaaagggatgcgtttagatcgttataaaacgcac
gatatagaaatagttattgataggttattggttgaaaaaaagcaacaaaaaagagttgaa
gaaactattaagactgcaatgtaccatggtgatgatactattttagttttagacgttgag
accaataaaactagatattttagtagaagtttaatgtgtcctacatcgggtatctcctac
cctaagcctgagcccaactcattttcgtttaattcaccaaagggtgcttgcgataattgt
aatggtttaggaactgtaaatgaagttaatattgacaaaataattcctgacccagaagtt
tcaattgccaatggtggtattgcaccaatcaatgagcaaaagagtaaatggattttaaaa
caaattgaacttattgcagaaaggtatcagttcaaattaactacaccaattaataaaata
cctaaagaagggttagatgttatattatatggtggtaaagaaaaatttgaagtattatct
aaagaaatgggcataacaagatcttactctattgattttgagggaattgtcaattttata
aaataccaatttgatgaaacgagttcagtttcaattaagcgttgggcatctacctatatg
gatgagaataactgctctgtttgcggtggttctcgtttaaaagtagaatcgttacatttt
aaaattcaagggaaaaacattgctgatttagcagacatggatattgttcaattggcagat
tggtttaaaaaagttaaaaataaacttagtaaaaaacaaacagcaattgcttctgaaatc
ataaaagaaattgaaactagaattcaatttttattagatgtaggcttagattatttagca
ttgaatagaagttcaaaaaccttatcaggaggtgaagcacaaaggatcagattagcaacc
caaattggatctcaacttgttggtgtattatacattttagatgagccaagtatcggattg
caccaaagagacaatcatagacttatagattctcttcaaaaattgagagacattggaaat
tctgttttggttgttgaacatgacaaagatatgattgagcaagctgattatgtaattgat
attggtcccaaagcaggaaagtttggtggtgagattatcagtagttctactccaaaagaa
ttattgaaaagccataccttaacagctgattatataaatggtactaaaaaaattgagatt
cctaataaaagaagaatcggaaacggtaaagttcttattttaaaaggagctacaggaaat
aatttaaaaaatgtaacggttactttaccattaggtaaaatgatttgtgttacaggagtg
tctggaagtggaaagtcaactttaattaatgaaacgttatatcctattttaaaccaacat
atatatagaggtgttaaagtaccaatgccttacaaaagtattacaggattagaacatgtt
gataaaatcatagacattaatcaatctcctattggtagaaccccaaggtcaaatcctgcc
acatacacaggtgttttcagtgaaatacgtaatctttttgctaaaactcccgaggctctt
attagaggttacaaacctggaaggttttcttttaatgtaaaagaaggtagatgtgaaact
tgtgaaggtggtggtgtacgcgttattgaaatgaattttttacctgatgtttatgtggaa
tgcgaaacatgtatgggtaaacgttttgatagagaaacgttagaaatacgttataagggg
aaatcaatttctgatgttcttaatatgaccattgatgaaagtgtcaagttttttgaacac
attccaaaaatacatagaaaggttaaaaccataaaagatgttggtttaggctacataact
ttagggcaacaatctactaccctttcaggtggagaggcacaacgcattaaattagccact
gaactttcgaaaaaggataccggaaatactttttatattttagatgaacctacaactggt
ttacattttgaagatattgatgttttaatgaaagtgttaaacaagttgactgataaaggt
aataccgttttaattatagaacacaacttagatgttgtaaaattggccgattatattata
gatattggccctgaaggtgggaaaaatggtggtaatgttttatgtactggaacacctgag
gaaatcatcaaagtagagactagctacactgcacagtttctaaaaaaagaattacattag
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