Aureibaculum algae: FF125_15670
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Entry
FF125_15670 CDS
T06009
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fbe
Aureibaculum algae
Pathway
fbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FF125_15670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbe03019
]
FF125_15670
Enzymes [BR:
fbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FF125_15670
Messenger RNA biogenesis [BR:
fbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FF125_15670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
EB1
DUF3023
AAA_19
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QCX39807
UniProt:
A0A5B7TYE6
LinkDB
All DBs
Position
complement(3730410..3731690)
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AA seq
426 aa
AA seq
DB search
MTFKDLGIVEPILKALNEKGYTHPTPIQEQAIPILLKGKDLMGCAQTGTGKTAAFAIPII
QHIYNNNQKGRDSKKIKALVVTPTRELAIQIFDNFKIYGKNTGIKCNVIFGGVKQHAQTA
ALRQGVDVLVATPGRLLDLMNQGFISLRDIEYFVLDEADQMLDMGFIHDIKKILAKLPQK
RQSLFFSATMPKSIVELSRKILGNFETVTIKPEQATAEKVEQAIYFVHKKAKIKLLVHIL
ETQSINSTLVFSRTKHGANKIVKLLDKEGINSAAIHGNKSQGARVKALEGFKDGKIKVLV
ATDIAARGIDIDELALVVNYDLPNIAETYVHRIGRTGRAKASGIAVSFCDQEERTYLRDI
EKLIKQKIPVISEHPFINFKDDNPESDEKPRQRSRSNNSSNRDSRNGNKIKKNPNNKRRE
SNSRNR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagacttaggcattgttgagccaatattaaaagccttaaacgaaaaaggc
tatacacacccaacaccaattcaagaacaagctatccccattttattaaaaggtaaagac
ctaatgggctgtgcacaaacaggtaccggtaaaacggccgcgtttgccattcctattata
caacatatttataataacaaccaaaaaggtagagattctaaaaaaattaaagcccttgta
gttacaccaactcgtgagttagctattcagatatttgacaattttaaaatctacggtaaa
aatacaggtatcaaatgcaatgttatttttggtggagtaaaacaacatgcccaaactgca
gctcttcgacaaggagttgatgtacttgtggcaacaccaggtagattattagatttgatg
aaccaaggttttatcagcttaagagatattgagtattttgtattagatgaggcagatcag
atgttagacatggggtttatacacgatattaaaaaaatattagccaaattacctcaaaaa
aggcaatcgcttttcttttcagcaacaatgcctaaaagtattgtagaattatctagaaaa
atattgggtaattttgaaacggtgacgataaaaccagaacaagccactgccgaaaaagtg
gagcaagctatttattttgtccacaaaaaagcaaaaataaaattattagtacatatactt
gaaacgcagtccattaattctacattggtgttttcaagaaccaagcatggtgccaataaa
attgtaaagttgttggataaagaaggaattaattcagcagctatccacggtaataaatcg
caaggagcaagggtaaaagcattagaaggttttaaagatggtaaaataaaagtgctagtt
gcaactgacattgcagcaagaggtattgatattgatgaactggccttagttgtaaattat
gatttgccaaatattgcagaaacgtatgtgcacagaataggtagaacaggacgtgctaag
gcaagtggtattgctgtttcattttgcgatcaagaagaaagaacctacttacgtgatatt
gaaaaattaatcaaacagaaaatacctgtgatatcagaacatccttttattaattttaaa
gatgataatccagaaagtgatgaaaagccaagacaacgttctagatctaataattcatct
aacagagatagtcgtaatgggaataaaatcaagaaaaatcctaataacaaaaggcgtgag
tcaaactctaggaatagataa
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