Aureibaculum algae: FF125_15765
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Entry
FF125_15765 CDS
T06009
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fbe
Aureibaculum algae
Pathway
fbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FF125_15765 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fbe03019
]
FF125_15765 (rny)
Messenger RNA biogenesis [BR:
fbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FF125_15765 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
HrpE
DUF5662
UPF0154
Motif
Other DBs
NCBI-ProteinID:
QCX39826
UniProt:
A0A5B7TXE8
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Position
complement(3747134..3748702)
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AA seq
522 aa
AA seq
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MDGMILPIIIGIVAGLIIGFFIAKALEKNKASAILKDAKSQASSIIKTAKSDAEVLKKDK
VLQAKEKFIELKSEHEKVILSRDRKVSEAEKRIREKESKVAQELDKSSKLNKKLEEKAAD
YDFRIDFLEKKQTEAEKLHKKHVEHLEVISGLSAEDAKKELVTSLRDEAKSDAMSYIQDT
LEEAKLTAQQEAKKIILSTIQRIGVEQTVENCVSVFNLESDDVKGRIIGREGRNIRAIES
ATGVEIIVDDTPEAIILSCFDPIRREIARLSLHKLVTDGRIHPARIEEIVAKTSKEINQE
IIEVGKRTVIDLGIHGLHPELIKVVGRMKYRSSYGQNLLQHSREVANLCALMAAELGLNP
KVAKRAGLLHDIGKVPETESELPHALLGMEWAQKYGEKPDVCNAIGAHHDEIEMKSLYAP
IVQVCDAISGARPGARRQVLDSYIQRLKDLENVAFGFVGVQKAYAIQAGRELRVIVESEK
VDDIKASELSFNISQKIQNDMTYPGQVRVTVIRETRAVNIAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatgatattaccaataattattggtattgtagcaggtttgattatcgggttt
tttatagcgaaagctcttgaaaaaaacaaagcatctgctatattaaaagatgcaaaaagc
caagcctcatcaattattaaaacagcaaaaagcgatgctgaagtattaaaaaaagataaa
gtattacaagctaaagaaaaatttattgaactaaaatcggaacacgaaaaggtgattcta
agtagagatagaaaagtttctgaagcagaaaaaagaatacgagaaaaggaatctaaagta
gctcaggaacttgataaaagtagtaagcttaataagaaattagaagaaaaagctgccgat
tacgattttagaattgattttttagaaaagaaacaaactgaggctgaaaaattacataaa
aaacatgttgaacatcttgaagtaatttcaggactttctgctgaagatgctaagaaggaa
ttagttacttctttaagagatgaagccaaatcagatgcaatgagctacattcaagataca
cttgaagaagctaaattgaccgctcaacaagaagctaaaaagattattttaagtactata
caacgtataggtgtagagcaaactgtagaaaactgtgtctctgtctttaacttagaatct
gatgacgttaaaggaagaatcattggtagggaaggaagaaatattagagctatagaatct
gctactggtgttgaaattattgttgatgatactccagaagcaattattctttcatgtttc
gatccaatacgtagagagattgcgagattatcgcttcacaaattggtgacagatggtaga
attcatcctgctagaattgaggaaatagtagcaaaaacttctaaagaaattaatcaagaa
attattgaagttggtaaacgtaccgtaattgacttaggaattcatgggttacaccctgaa
ttaattaaagttgtaggtagaatgaaataccgttcttcttatggacaaaatttattacaa
cactcgagagaagttgctaatttatgtgcattaatggctgcggaattagggttaaatcct
aaagtggctaaacgtgcaggtttattacatgatataggtaaagtaccagaaaccgagagt
gaattacctcatgctttattaggtatggaatgggctcagaaatacggtgaaaaacctgat
gtttgtaatgctattggtgctcaccatgacgagatcgagatgaaatctttatacgctcca
attgttcaagtttgtgatgctatttcaggtgctagacctggtgctagacgtcaagtgtta
gattcttatattcaacgtttaaaggatcttgaaaatgtagcattcggttttgtaggtgta
caaaaagcctacgctattcaagcgggtagagaattacgtgttattgttgaaagtgaaaaa
gtagatgatataaaagcatcagaattatcatttaatatttcacaaaaaattcaaaacgat
atgacctatccaggtcaggttcgtgttactgtaattagagaaacaagagctgtaaatatt
gcaaaataa
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