KEGG   Aureibaculum algae: FF125_15765
Entry
FF125_15765       CDS       T06009                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
fbe  Aureibaculum algae
Pathway
fbe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fbe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FF125_15765 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fbe03019]
    FF125_15765 (rny)
Messenger RNA biogenesis [BR:fbe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FF125_15765 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH-I_KHDC4-BBP KH_2 HrpE DUF5662 UPF0154
Other DBs
NCBI-ProteinID: QCX39826
UniProt: A0A5B7TXE8
LinkDB
Position
complement(3747134..3748702)
AA seq 522 aa
MDGMILPIIIGIVAGLIIGFFIAKALEKNKASAILKDAKSQASSIIKTAKSDAEVLKKDK
VLQAKEKFIELKSEHEKVILSRDRKVSEAEKRIREKESKVAQELDKSSKLNKKLEEKAAD
YDFRIDFLEKKQTEAEKLHKKHVEHLEVISGLSAEDAKKELVTSLRDEAKSDAMSYIQDT
LEEAKLTAQQEAKKIILSTIQRIGVEQTVENCVSVFNLESDDVKGRIIGREGRNIRAIES
ATGVEIIVDDTPEAIILSCFDPIRREIARLSLHKLVTDGRIHPARIEEIVAKTSKEINQE
IIEVGKRTVIDLGIHGLHPELIKVVGRMKYRSSYGQNLLQHSREVANLCALMAAELGLNP
KVAKRAGLLHDIGKVPETESELPHALLGMEWAQKYGEKPDVCNAIGAHHDEIEMKSLYAP
IVQVCDAISGARPGARRQVLDSYIQRLKDLENVAFGFVGVQKAYAIQAGRELRVIVESEK
VDDIKASELSFNISQKIQNDMTYPGQVRVTVIRETRAVNIAK
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggatggaatgatattaccaataattattggtattgtagcaggtttgattatcgggttt
tttatagcgaaagctcttgaaaaaaacaaagcatctgctatattaaaagatgcaaaaagc
caagcctcatcaattattaaaacagcaaaaagcgatgctgaagtattaaaaaaagataaa
gtattacaagctaaagaaaaatttattgaactaaaatcggaacacgaaaaggtgattcta
agtagagatagaaaagtttctgaagcagaaaaaagaatacgagaaaaggaatctaaagta
gctcaggaacttgataaaagtagtaagcttaataagaaattagaagaaaaagctgccgat
tacgattttagaattgattttttagaaaagaaacaaactgaggctgaaaaattacataaa
aaacatgttgaacatcttgaagtaatttcaggactttctgctgaagatgctaagaaggaa
ttagttacttctttaagagatgaagccaaatcagatgcaatgagctacattcaagataca
cttgaagaagctaaattgaccgctcaacaagaagctaaaaagattattttaagtactata
caacgtataggtgtagagcaaactgtagaaaactgtgtctctgtctttaacttagaatct
gatgacgttaaaggaagaatcattggtagggaaggaagaaatattagagctatagaatct
gctactggtgttgaaattattgttgatgatactccagaagcaattattctttcatgtttc
gatccaatacgtagagagattgcgagattatcgcttcacaaattggtgacagatggtaga
attcatcctgctagaattgaggaaatagtagcaaaaacttctaaagaaattaatcaagaa
attattgaagttggtaaacgtaccgtaattgacttaggaattcatgggttacaccctgaa
ttaattaaagttgtaggtagaatgaaataccgttcttcttatggacaaaatttattacaa
cactcgagagaagttgctaatttatgtgcattaatggctgcggaattagggttaaatcct
aaagtggctaaacgtgcaggtttattacatgatataggtaaagtaccagaaaccgagagt
gaattacctcatgctttattaggtatggaatgggctcagaaatacggtgaaaaacctgat
gtttgtaatgctattggtgctcaccatgacgagatcgagatgaaatctttatacgctcca
attgttcaagtttgtgatgctatttcaggtgctagacctggtgctagacgtcaagtgtta
gattcttatattcaacgtttaaaggatcttgaaaatgtagcattcggttttgtaggtgta
caaaaagcctacgctattcaagcgggtagagaattacgtgttattgttgaaagtgaaaaa
gtagatgatataaaagcatcagaattatcatttaatatttcacaaaaaattcaaaacgat
atgacctatccaggtcaggttcgtgttactgtaattagagaaacaagagctgtaaatatt
gcaaaataa

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