Flavobacterium bizetiae: L0669_06720
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Entry
L0669_06720 CDS
T08699
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fbi
Flavobacterium bizetiae
Pathway
fbi03030
DNA replication
fbi03430
Mismatch repair
fbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0669_06720 (dnaE)
03430 Mismatch repair
L0669_06720 (dnaE)
03440 Homologous recombination
L0669_06720 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbi03032
]
L0669_06720 (dnaE)
03400 DNA repair and recombination proteins [BR:
fbi03400
]
L0669_06720 (dnaE)
Enzymes [BR:
fbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0669_06720 (dnaE)
DNA replication proteins [BR:
fbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L0669_06720 (dnaE)
DNA repair and recombination proteins [BR:
fbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L0669_06720 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Intimin_C
SRP14
Motif
Other DBs
NCBI-ProteinID:
UTN05603
LinkDB
All DBs
Position
1495228..1499766
Genome browser
AA seq
1512 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDSDNWPRCIQIAWQLHDEMGQLIEHQDYLVKPDGFNIPY
DAERIHGISTELADADGITLAEVLEKFNIALSKTKFIVGQNLGFDVNIMGAEFHRMGVDS
PMSSMPVLDTCTEVTASLLKLPGGRGGRFKLPTLTELHEYLFNKPFAEAHNATADVEATT
RCFLELIRREVFTKEELDVPKDYFKEFQNRNPQEFPLIGLKHINLKAASDKIREQLKALE
SVGQEPAVSHSDREDFKEAKYAHLHNHTQFSVLQSTIGIGNIVAATAKNGMPAVAMTDTG
NMMGAFHFVSAVMNHNKAASGKNKALVEAGEEPTETEIKPIVGCEFNVCDNHLDKSKKDN
GNQVVLLAKNKNGYHNLAKMSSIAFTNGFYYVPRIDRAIIEKYKEDIMVLSGNLYGEIPS
KILNIGENQAEEALIWWKEQFGDDFYLEIMRHNQEDENRVNKTLIEFSKKHNVKLIATNN
TYYLNKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYYKSGEEMKKLFADLPD
SIINIQEIVDKVEIYSLYRDVLLPKFDIPEEFVVVEDEADGGVRGENKYLRHLTMVGAKK
RYGEITESIQERLDFELLTISNSGYPGYFLIVQDFIAEARKMDVSVGPGRGSAAGSAVAY
CLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVINKYGQNQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPGMMPSKWNLARFISESEEEVKKALRSDE
FDNVKELIAIANEDDLAGETIQQAKILEGSMRNTGIHACGVIITPSDITNFVPVTTAKDS
DLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRNGIDLDPDTFPIDDVETYA
LFQRGETVGIFQYESPGMQKYMKDLKPTVFGDLIAMNALYRPGPLEYIPSFVRRKNGEEE
IKYDLDACEEYLGETYGITVYQEQVMLLSQSLADFTKGEADVLRKAMGKKQKDVLDKMKP
KFVEQAAKKGHDAKVLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAA
VLSNNMNDIKQVSFFMEECKRMGLQVLGPDVNESFYKFTVNDEYAVRFGMGAIKGVGSGA
VATIVESRKDGKYKSIFDLAKRIDLRAANKKAIENLALAGGFDSFEGTTRAQYFHDDGDG
ITFYEKAIRYGSKFQENENSSQVSLFGETSEVQIDEPVVPPCEDWSTMEKLAKEKEVVGI
YISGHPLDDFRFEMKYFCNSRLESLKSMNEYVGKNLNFAGIINNVQHRVAKNGKGWAVFN
LEGYDESYEFKIFGEEYLKFRHFLIQNNFAFIKILIKDGWVNHDTGKKSDPRMQFVEIRQ
LQDILEAFAKKLILLLNIKDLQEEFIHSLSRLFSENKGDNSVTFEIMELEKIKRLVEVET
PTDFEEADDAVFVDENEDTEAAIEETKIQEVNEVEEIKVVTKLTMPSRRLKVKISTELLI
ELEKMQINFKLN
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatattcgataccgaaacaaccggattaccaaaacgctgggatgctccaata
accgattctgataactggcctcgctgtattcagatcgcatggcagcttcatgacgaaatg
ggacagcttattgaacatcaggattacctggtaaaacctgacggatttaatattccgtat
gatgcggagcgtattcacggaatttcgacagaattggccgacgccgatggaattactttg
gctgaagttttggagaaattcaatattgctttaagcaaaaccaaatttattgtaggtcag
aatttaggtttcgacgttaatattatgggcgctgaatttcatagaatgggagtagattct
cctatgagttcaatgccggttttagatacttgtaccgaggttactgcttcattattaaaa
cttcccggaggtcgtggaggaaggtttaaattaccaacacttacagaattacacgaatat
ctttttaataaacctttcgcagaagcgcacaacgcaactgccgacgttgaggcaactacg
cgttgttttctggaattaataagaagagaagtttttaccaaagaagaactggatgttccg
aaggattatttcaaggaatttcaaaatagaaatccacaggaatttccgttaattggttta
aaacacatcaatttaaaagcagcttctgataaaatcagagagcaattaaaagctttagaa
tctgttgggcaagaacctgcagtttcacattctgacagagaagattttaaagaggcaaaa
tacgcgcatttacacaatcatacccaattttcggttttacaatcaactataggaattgga
aatattgttgcggctacagccaaaaacggaatgcctgccgttgccatgacggatacagga
aacatgatgggagcttttcactttgtgagcgccgttatgaaccataataaagcagcatca
ggaaaaaataaagctttggtcgaagcaggtgaagagccaacagaaaccgaaataaaacca
atcgtaggttgcgaatttaatgtttgcgacaatcacttagataaaagtaaaaaagacaac
ggaaatcaggttgtattgttagccaaaaacaaaaacggttatcacaatctggcgaaaatg
tcttcgatcgcttttacaaacggattttattatgttccgaggattgaccgtgccattatc
gaaaaatacaaagaagatatcatggttttgtccgggaatttatacggagagattccgagt
aagatcctgaacattggtgaaaaccaagccgaagaagccttgatctggtggaaagaacaa
tttggcgatgacttttatcttgagattatgcgacataatcaggaagatgaaaatcgtgta
aacaaaacactgattgagttttctaaaaagcacaatgtcaaattaattgcaaccaataat
acctattatttaaataaagaagacgccaatgcacacgacattttattgtgtgtaaaagat
ggtgaaaaacaagctacgccaattggtcgtggacgtggatatcgttacggattacctaat
caggagtattattacaagtctggagaagagatgaaaaaactctttgccgatttgcctgat
tcgattatcaatattcaggaaattgtagataaagtagagatttattcgctttatcgagat
gtattgcttcctaaatttgatatcccggaagaatttgtagttgttgaagatgaagctgat
ggcggagttcgaggtgaaaataaatacctgcgacaccttacaatggtgggagcaaaaaaa
cgatacggagaaattaccgaatcgattcaggaacgtttagattttgagttattaacgatt
tccaattccggatatccgggttacttcctgattgttcaggatttcatcgctgaagcccga
aaaatggacgtttcggtagggccaggtcgtggatctgctgcgggatctgccgtggcttat
tgtttaggaattaccaatattgaccctattaagtacgatttgctttttgagcgtttcctt
aatcctgaccgtgtatccatgcccgatattgatatcgattttgatgacgagggtcgtggt
cgtgttatggattacgtaattaataagtacggacaaaatcaggtggcgcaaattattacc
tatggtaaaatggcaaccaaatctgcgattcgtgatacggctcgtgtactggatttacca
ttgtttgaagccgatagaattgcaaaactgattccgggaatgatgccgtcaaaatggaat
ttggcgcgttttatttctgaaagcgaagaagaggttaaaaaagcgcttcgttctgatgaa
tttgataatgtaaaagaattaatcgccattgccaatgaagatgatttggccggagaaacc
attcaacaggcaaaaatccttgaaggatcgatgcgaaataccggaattcacgcctgtggt
gtaatcatcacgccatcggatattacgaatttcgttcccgtaactacagcaaaagattct
gatttatatgtaacacagtttgataactcggttgcagaaagtgcaggattgctgaaaatg
gactttttgggtctgaagacccttaccttgattaaagataccgttaaactggtaaaatat
agaaacggaattgatctcgatccggataccttcccgattgatgatgttgagacttatgca
cttttccagagaggagaaacagttggaatcttccaatatgagtcacccggaatgcagaaa
tacatgaaagatctaaaaccaacggtttttggagatttaattgccatgaacgccttgtat
cgtccgggacctttagagtatattccgtctttcgtacgaagaaaaaatggcgaagaagaa
atcaaatacgatttagatgcctgtgaggaatatttaggagagacttacggaattaccgtt
tatcaggagcaggtaatgcttttgtcgcaatcgctggctgactttacaaaaggtgaggcc
gacgttttgcgtaaagcgatgggtaagaaacaaaaagatgtactagataaaatgaagcct
aagttcgtagaacaagcggcgaaaaaaggtcatgatgcaaaagttttagagaagatctgg
aaagactgggaagcatttgcgagttacgccttcaacaaatcgcactcgacttgttatgcc
tggattgcgtatcaaacagcctatcttaaagcgcattatcctgctgaatatatggcagcg
gtactttcgaataatatgaatgatatcaaacaagtatcattttttatggaagaatgcaaa
cgaatgggcttacaggttttagggccggatgtaaacgaatcgttttacaaatttaccgta
aatgatgaatacgctgtccgttttggtatgggcgcgattaaaggagtaggttccggagct
gtggcaaccattgtagaaagcagaaaagacggtaagtacaaatcgatttttgatttggcg
aaacgtatcgatttgcgtgctgcgaataaaaaagcaatcgaaaatttggctttggcagga
ggttttgattcttttgaaggaacgacaagagcccaatattttcatgacgatggcgacgga
attactttttatgaaaaagcaattcgttacggatctaaatttcaggaaaacgaaaactca
tcacaagtaagtttgtttggagaaaccagcgaagtacaaattgatgaaccagttgtgcca
ccatgtgaagactggagcacgatggaaaaattggccaaagagaaagaagtagttggaatc
tatatttcaggacatcctctggatgactttagatttgagatgaaatatttctgtaattcc
cgattagaatccttaaaaagcatgaacgaatatgtgggtaaaaatctaaactttgccgga
atcattaataacgttcagcatcgtgtggcaaaaaacggaaaaggctgggcagtatttaat
ctcgaaggttatgacgaaagttatgagtttaagatttttggtgaagaatacttgaaattc
cgccatttcctgattcagaataattttgccttcataaaaatattaataaaagacggttgg
gtcaatcatgataccggtaaaaagtcagatccaagaatgcaatttgtcgagattcgacag
ttgcaggatattctggaagcttttgcaaaaaaactgattttactattaaatataaaagac
ttacaagaagaatttattcattcgttgagtcgcttgtttagtgaaaataaaggagacaat
tctgtgacttttgaaatcatggagttagaaaagataaaacgtttggtcgaagtagaaacc
ccaactgattttgaagaagctgatgatgctgtttttgtcgacgagaacgaagataccgaa
gcagcaattgaagaaactaaaattcaggaagtaaatgaagtcgaagaaataaaagttgta
accaaacttacaatgcctagtcgcaggctaaaagttaagatttctaccgagttattgata
gaattagagaaaatgcagataaattttaagctaaactaa
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integrated database retrieval system
