Flavobacterium bizetiae: L0669_09645
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Entry
L0669_09645 CDS
T08699
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fbi
Flavobacterium bizetiae
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbi03032
]
L0669_09645 (topA)
03400 DNA repair and recombination proteins [BR:
fbi03400
]
L0669_09645 (topA)
Enzymes [BR:
fbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L0669_09645 (topA)
DNA replication proteins [BR:
fbi03032
]
Prokaryotic type
DNA Topoisomerases
L0669_09645 (topA)
DNA repair and recombination proteins [BR:
fbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L0669_09645 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Poly_export
DUF4294
Motif
Other DBs
NCBI-ProteinID:
UTN06163
LinkDB
All DBs
Position
2181979..2184513
Genome browser
AA seq
844 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDFQVESSYGHIADLPSKEIGVDVENGFKPKYEVSPDK
KALVSKLKTLSKNAEMVWLASDEDREGEAISWHLAEELKLDTKKTKRIVFHEITKTAILK
AIENPREIDYNLVNAQQARRVLDRLVGYELSPVLWRKIKGGLSAGRVQSVSVRLIVERER
EIQNFNAVASYSIVAEFVNEAGKTFKAKLPKNFNTKKEAEDFLNQNIGSQYKVADLETKP
TKKSPTAPFTTSTLQQEAARKLYLPVGITMQLAQRLYEAGLITYMRTDSVNLSKDAMDAA
EAEIIKSYGKEFSKPRVFANKSKGAQEAHEAIRPTDMSRHTVNIDRDQARLYDLIWKRTL
ASQMSDAQLERTNVKIEANNHSEIFTASGEVLLFEGFLKVYLEGHDDDEEEQEGMLPALK
VNEKLVNNYITATERYSRPPARYTEASLVKKLEELGIGRPSTYAPTISTIINRNYVEKGT
LEGQERNYTQLTLQANKVGEKLLKENTGSDKGKLVPTDIGTIVTDFLVKNFGNILDYNFT
AKVEQDFDEIAEGNIDWAIMMQEFYNKFHPNVKEVEANAERESGERILGKDADGRQVSVR
LGKFGPMAQIGEADDEDKKFASLMADQNIGNITLEEALNLFLLPKNLGEYKGEEVEVSNG
RYGPYVRHGSVFISLPKGEDPLSLSKERAQGLIDEKAIADAPIAVYKGEGVQKGVGRFGP
FIKWNGIFINVSKKYNFDNLSQQEIEELIEDKLQKNIDKVLHNWEDEGILVEKARWGRSV
ITKGKIKIELSKDVDATKLTLAQVQEMIAAKIPAKKTPAKKATTAKKATTAKKAPAKKTA
AKKK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaatagtggagtcacctgcaaaggcgaaaacaatcgagaaattt
ctgggaagtgattttcaagtagagtcaagttacggacatatagcagatttaccatcaaag
gaaataggagtagatgtagagaatggttttaaacccaaatacgaagtttctccggataag
aaagccttggtaagcaaattgaaaacactatctaagaatgccgaaatggtttggctggcg
agcgatgaggaccgcgagggtgaggctatttcatggcacctggcggaagaattaaaacta
gatactaaaaaaacaaagcgaattgtttttcacgagattacaaaaactgcgattcttaaa
gcaatcgagaatcctagagaaatagattataatttagtaaacgcacaacaagcacgtcgt
gtattagaccgtttagtaggttacgaattatctcctgttttatggagaaaaattaaagga
ggattatctgctggtcgtgtgcaatcagtttcagtacgcttaattgttgagagagaacgc
gaaatccaaaactttaatgcagttgcgagttattctatcgtagcagaatttgttaatgaa
gccggaaaaactttcaaagccaaattaccaaagaacttcaatacaaaaaaagaagccgaa
gattttttaaatcaaaacatcggatcacaatataaggtagccgatttagaaactaaacct
accaaaaaatcaccaacagcaccatttacaacttctaccttgcaacaagaagcagctaga
aaattgtatttaccggttggtattaccatgcagcttgcacaacgtttatacgaggccgga
cttatcacttatatgagaaccgatagtgtaaacctttctaaagatgcgatggatgccgct
gaagctgaaatcataaaatcatacggaaaagaattctcgaaaccgagagtttttgcaaac
aaaagcaaaggagcacaagaagcgcacgaagcaattcgtccgactgatatgtcacgtcac
accgtaaatatcgatcgggatcaggcacgtttatatgatttgatctggaaaagaacattg
gcttctcaaatgagcgatgcgcaattagaaagaacaaacgtaaaaatcgaagcaaacaat
cacagcgaaatttttacagcttctggagaagttttactttttgaaggtttcctaaaagtt
tatttagaaggtcatgatgacgacgaggaagaacaagaaggaatgttgcctgctttaaaa
gtaaacgaaaaattagttaacaattatatcacagcaaccgaaagatattcaagaccgccg
gctcgttatacagaggcttctttggtaaaaaaattagaagaactaggaatcggacgtccg
tctacttacgctccaactatttcaactatcatcaacagaaactatgtagaaaaaggaact
cttgaaggtcaggaacgtaattatacccaacttactttgcaagccaataaggtaggagag
aagttgctaaaagaaaatacaggttcagataaaggaaaattagttccaacagatattggt
acaatcgttactgatttcttagtgaagaatttcggaaacattctggattataattttact
gcaaaagtagaacaagattttgatgagattgccgaaggaaatatagactgggcaatcatg
atgcaggaattctacaataaatttcacccaaatgtaaaagaggttgaagcaaatgcagaa
cgcgaaagcggagaaagaatccttggtaaagatgctgacggaagacaagtttctgttcgt
ttgggaaaatttggaccaatggctcaaattggagaagcagatgacgaagataaaaaattc
gccagtttaatggccgatcaaaatatcggaaacattacacttgaggaagctttgaattta
tttttattgcctaaaaatttaggagaatataaaggagaagaagtggaagtaagtaatggt
cgttatggtccttatgtacgtcacggaagtgtttttatttctttgccaaaaggagaagat
ccgttaagcctttcaaaagaaagagcacagggattaattgatgaaaaagcaattgccgat
gctcctattgcagtttacaaaggtgagggtgttcaaaaaggtgtgggacgttttggtcct
ttcatcaaatggaacggaattttcattaacgtaagtaaaaaatacaatttcgataattta
tcacaacaggaaatcgaagagttgattgaggataaattacagaaaaatatagataaagta
cttcacaattgggaagacgaaggaattttggttgaaaaagcgcgttggggtcgttcggtt
attacaaaaggtaaaatcaaaattgaactaagtaaagatgttgatgcaacaaaattaaca
ttggctcaggttcaggaaatgattgccgctaaaatacctgcaaaaaagacaccggcaaaa
aaggctacaacagcaaaaaaagcaacaaccgctaagaaagctccagctaaaaaaacagct
gctaaaaagaaataa
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