Flavobacterium bizetiae: L0669_10345
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Entry
L0669_10345 CDS
T08699
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fbi
Flavobacterium bizetiae
Pathway
fbi03030
DNA replication
fbi03430
Mismatch repair
fbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0669_10345
03430 Mismatch repair
L0669_10345
03440 Homologous recombination
L0669_10345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fbi03032
]
L0669_10345
03400 DNA repair and recombination proteins [BR:
fbi03400
]
L0669_10345
Enzymes [BR:
fbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0669_10345
DNA replication proteins [BR:
fbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L0669_10345
DNA repair and recombination proteins [BR:
fbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L0669_10345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
RNase_H_2
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
UTN06296
LinkDB
All DBs
Position
complement(2349315..2350694)
Genome browser
AA seq
459 aa
AA seq
DB search
MKKQEYAIVDIETTGGNASGSRITEIAIIIHDGENVIERYETLVNPEKEIPISIFALTGI
NNEMVANAPIFDDVSEKVLEMLTDRIFVAHNVNFDYSFVRHQLEQAGFKWTARKLCTVRA
ARKIRPGLGSYSLGNLCNSLDISLENRHRAGGDADATAILFSKLLEWDDEGHIEKMIKNT
SQDQRLPPNLPPEDFNNLPEKPGVYYFYNEVKKVIYVGKAVNIKKRVASHFSGHKINPQR
QHFLRDIYSISFEVCGNELMALLLECTEIKHLWPTYNRALKRFEPKFGLYEYEARNGYKY
LAIGKLNKFQSCIEHFSSLHEATNILRGLAERFEIDYRFCKYSKPQEGEMFQNKDITDLP
DVSLHNEQVDNAIDFLLNNRPTFAIIEKGRTAHERSCIWIENGHFYGMGYIPLDVSIKDP
LEIKNYATPYKSNQYIVQLIFAYAEKNPRKVFFNKQFLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcaagaatacgccatagtagatatcgaaaccaccggtggaaacgccagtggc
agccgcattaccgaaattgcgatcatcattcatgacggagaaaacgtgattgaacgatat
gaaacgctcgttaatccggaaaaggaaattccaatttcgatttttgccttaacgggaatt
aataacgaaatggtagctaatgcgccaatttttgatgatgtttcagagaaagtattagaa
atgcttaccgatcggatttttgtcgctcataatgtcaattttgattattcgttcgttcgc
catcaactggaacaagcgggttttaaatggacagcaagaaagttatgcaccgttcgcgcg
gcacgaaaaatcagaccgggtttaggatcatatagtttaggaaatctttgcaattcatta
gatatatctttagaaaacaggcatcgtgctggcggagacgcagatgctactgctatttta
ttttcgaaattactcgaatgggacgatgaaggccatatcgaaaaaatgatcaaaaacacg
tcacaagatcagcgcttaccgcctaaccttccgccggaagattttaataatttacctgaa
aaacctggtgtttattatttttataatgaggtaaaaaaagtaatctatgttgggaaagcg
gttaatataaaaaaacgcgttgcttctcattttagcggacataaaattaatccgcaaaga
cagcatttcttacgggatatttattcgatttcttttgaagtttgcggcaacgaattaatg
gcgttgctattagaatgtacagaaatcaaacatctttggcccacttataacagggcttta
aaacgatttgagcccaaatttggcttgtacgaatatgaagcccgcaacggatacaaatat
ctggcaattggcaaactcaataaatttcagtcatgcattgagcattttagtagtttacat
gaggcaacaaacatactgcggggtctggcagaacgatttgaaattgattatagattttgc
aaatattcaaaacctcaggaaggagaaatgtttcaaaataaagatataacagatttgccg
gatgtttcccttcacaatgagcaagtcgacaatgcaattgattttttattaaacaacaga
cccacttttgccattatagaaaaaggaagaacagcacacgaacgaagctgtatctggata
gaaaatggtcatttttatggtatgggatatattccgctagatgtttcaattaaagatccc
ttagaaataaaaaattatgctacgccgtataaaagcaatcaatacatcgtgcagttaatt
tttgcttacgcagaaaaaaacccacgtaaagtattctttaacaaacagtttctaaaataa
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